Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b1013	b1014	b1015	b4490	b1018
		ycdC	putA	putP	efeU	ycdO
stress	LB Aerobic with Irgasan 0.0000003125 mM	-1.7	-0.1	-0.3	+0.2	-0.2
carbon source	Ying_AminoAcid20 rep A; time point 3	+0.5	-1.3	-1.4	+0.2	-0.0
carbon source	Ying_AminoAcid20 rep A; time point 2	+0.1	-0.9	-1.1	-0.1	+0.0
carbon source	Ying_AminoAcid20 rep C; time point 3	+0.4	-1.2	-1.2	+0.0	-0.0
carbon source	Ying_AminoAcid20 rep B; time point 3	+0.2	-1.2	-1.0	+0.2	+0.1
carbon source	carbon source D-Glucose 0.25mM	-2.4	+0.2	+0.1	+0.2	+0.1
phage	T7_phage 0.00015625 MOI TC4	-1.2	+0.4	-0.3	-0.3	-0.1
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-1.4	-0.3	+0.2	+0.0	+0.2
carbon source	Ying_AminoAcid20 rep C; time point 2	+0.6	-0.9	-0.8	-0.0	+0.0
carbon source	casaminos (C)	+0.6	-0.8	-0.7	-0.1	-0.1
predation	6 hr rep1_HD100_10fold_dilution_grewON	+0.4	-0.3	-0.9	-0.6	+0.4
stress	Chloramphenicol 0.005 mg/ml	-1.6	+0.1	+0.2	+0.2	+0.1
stress	LB Aerobic with Oxytetracycline 0.00000125 mM	-0.9	-0.1	+0.1	+0.5	-0.3
carbon source	casaminos (C)	+0.6	-0.6	-0.6	-0.1	+0.2
phage	Ste41	-1.7	+0.4	-0.1	+0.8	+0.3
stress	LB Anaerobic with Doxycycline hyclate 0.000000390625 mM	-0.8	+0.2	-0.2	+0.3	+0.4
stress	LB Anaerobic with Ampicillin 0.00000195313 mM	-1.1	+0.2	+0.7	+0.3	-0.1
phage	Ste41	-1.4	+0.3	-0.1	+1.5	-0.1
attachment_assay_attached_sample	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+1.2	-0.1	-0.2	+0.1	-0.7
phage	T7_phage 0.0015625 MOI TC2	+1.1	+0.0	-0.7	+0.5	-0.3
phage	Δdbn_10	+1.5	-0.3	+0.0	-0.3	-0.2
carbon source	carbon source D-Mannose 5mM	+0.3	+0.5	+0.4	-0.6	+0.3
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+1.3	-0.4	+0.0	-0.2	+0.2
stress	Ciprofloxacin Hydrochloride 0.0003 mM	+1.4	-0.0	-0.3	+0.2	+0.1
motility	outer cut, LB soft agar motility assay	+1.0	-0.4	-0.2	+0.9	+0.0
stress	LB Anaerobic with Trimethoprim 0.0000003125 mM	+0.9	+0.1	-0.2	+0.4	+0.4
stress	LB Anaerobic with Furaltadone 0.000015625 mM	+1.0	-0.1	-0.1	+0.6	+0.3
control	PBS_cage_1_mice _Feces_16 hr	+1.2	-0.2	+0.3	-0.0	+0.6
control	PBS_cage_2_mouse_2_Cecum_40 hr	+1.4	+0.1	-0.1	+0.5	+0.2
phage	Papa dilution 10-1 cacl2 maltose	+1.5	+0.4	+0.4	+0.8	-0.3