Fitness for 5 genes in Escherichia coli BW25113

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500 ntdps and rhtA are separated by 298 nucleotidesrhtA and ompX are separated by 352 nucleotidesompX and ybiP are separated by 48 nucleotidesybiP and yliL are separated by 73 nucleotides b0812: dps - DNA protection during starvation conditions (NCBI), at 847,631 to 848,134 dps b0813: rhtA - threonine and homoserine efflux system (NCBI), at 848,433 to 849,320 rhtA b0814: ompX - outer membrane protein X (NCBI), at 849,673 to 850,188 ompX b0815: ybiP - predicted hydrolase, inner membrane (NCBI), at 850,237 to 851,820 ybiP b0816: yliL - hypothetical protein (NCBI), at 851,894 to 852,163 yliL
Group Condition b0812 b0813 b0814 b0815 b0816
dps rhtA ompX ybiP yliL
stress D-Cycloserine 0.1 mg/ml -5.7 -0.1 -0.3 -0.1 N.D.
stress LB Aerobic with Ramoplanin 0.000125 mM -0.0 +0.3 -4.4 -0.5 N.D.
stress Bacitracin 1 mg/ml -0.3 -0.2 -3.6 -0.5 N.D.
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.6 -0.2 -3.6 -0.1 N.D.
stress LB Aerobic with Ramoplanin 0.000125 mM +0.3 -0.2 -4.1 -0.3 N.D.
stress octanol 0.08 vol% +0.1 +0.3 -4.9 +0.4 N.D.
stress 3-methyl-2-butenol 1.25 vol% -3.5 -0.0 +0.0 -0.0 N.D.
stress Benzalkonium Chloride 0.004 mg/ml -0.1 +0.4 -3.9 +0.2 N.D.
carbon source carbon source D-Mannose 1mM -2.5 +0.1 -0.4 -0.2 N.D.
carbon source carbon source D-Glucose 0.25mM -2.4 -0.1 -0.2 -0.3 N.D.
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -0.2 +0.1 -2.1 -0.5 N.D.
stress 3-methyl-2-butenol 1.25 vol% -2.2 +0.0 -0.2 -0.0 N.D.
carbon source carbon source D-Glucose 1mM -2.3 +0.1 +0.2 -0.2 N.D.
stress LB Anaerobic with Benzethonium chloride 0.000015625 mM -0.3 +0.2 -2.2 +0.2 N.D.
carbon source carbon source D-Glucose 1mM -2.0 -0.3 +0.3 -0.1 N.D.
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.0 +0.1 -1.9 -0.4 N.D.
carbon source carbon source D-Glucose 0.5mM -1.3 -0.3 -0.0 -0.4 N.D.
stress 2,4-Dinitrophenol 2 mM +0.1 -0.1 -1.9 -0.0 N.D.
carbon source carbon source D-Mannose 0.5mM -1.7 +0.1 +0.1 -0.4 N.D.
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.2 +0.1 -1.5 -0.2 N.D.
stress Bacitracin 0.5 mg/ml +0.0 +0.3 -2.0 -0.0 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.2 +0.1 -2.4 +0.3 N.D.
stress LB Anaerobic with Cephalothin 0.0000078125 mM +0.2 +0.0 -1.7 -0.1 N.D.
stress undecene 5 vol% -1.3 +0.1 -0.5 +0.1 N.D.
carbon source carbon source D-Glucose 0.5mM -1.8 +0.1 +0.2 -0.1 N.D.
stress Cisplatin 0.1 mg/ml +0.2 -0.4 -1.6 +0.2 N.D.
carbon source carbon source D-Glucose 0.25mM -1.5 +0.0 +0.4 -0.2 N.D.
stress Chlorite 1.25 mM -0.8 -0.2 +0.7 -0.4 N.D.
carbon source carbon source D-Mannose 0.5mM -1.0 -0.3 +0.9 +0.2 N.D.
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM +0.7 -0.0 +1.3 +0.1 N.D.
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