Fitness for 5 genes in Escherichia coli BW25113

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500 ntbioB and bioF overlap by 4 nucleotidesbioF and bioC overlap by 14 nucleotidesbioC and bioD overlap by 8 nucleotidesbioD and uvrB are separated by 578 nucleotides b0775: bioB - biotin synthase (NCBI), at 808,567 to 809,607 bioB b0776: bioF - 8-amino-7-oxononanoate synthase (NCBI), at 809,604 to 810,758 bioF b0777: bioC - predicted methltransferase, enzyme of biotin synthesis (NCBI), at 810,745 to 811,500 bioC b0778: bioD - dethiobiotin synthetase (NCBI), at 811,493 to 812,170 bioD b0779: uvrB - excinuclease ABC subunit B (NCBI), at 812,749 to 814,770 uvrB
Group Condition b0775 b0776 b0777 b0778 b0779
bioB bioF bioC bioD uvrB
carbon source D-Glucose (C) MOPS -2.6 -2.2 -1.3 -2.6 +0.0
carbon source D-Glucose (C) MOPS -3.3 -1.5 -1.7 -2.1 +0.0
carbon source succinate (C) -3.2 -2.0 -1.1 -1.8 -0.1
carbon source L-Malic (C) -1.6 -1.7 -1.9 -2.0 -0.1
carbon source D-Galacturonic Acid (C) MOPS -2.4 -1.3 -1.7 -1.9 +0.1
carbon source D-Galacturonic Acid (C) MOPS -2.4 -1.5 -1.6 -1.8 +0.3
carbon source L-Malic (C) -2.1 -1.3 -1.7 -1.7 +0.1
carbon source succinate (C) -2.0 -1.5 -1.3 -1.6 -0.0
carbon source Glycolic Acid (C) -1.8 -1.0 -1.7 -1.2 -0.3
stress LB Aerobic with Nitrofurantoin 0.00003125 mM +0.4 +0.3 -0.7 -1.0 -5.0
stress Cisplatin 0.1 mg/ml +0.1 +0.1 +0.3 -0.7 -5.6
stress Cisplatin 0.1 mg/ml -0.2 -0.2 +0.1 +0.0 -5.5
stress LB Anaerobic with Furaltadone 0.000015625 mM -0.0 -0.6 +0.2 -0.8 -4.5
stress Cisplatin 0.1 mg/ml -0.0 +0.2 +0.2 -0.2 -5.5
carbon source Glycolic Acid (C) -1.8 -1.0 -0.7 -1.3 -0.3
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -1.3 -1.1 -1.0 -1.6 -0.1
stress 2-nitrobenzenesulfonyl fluoride -0.3 -0.1 -0.8 -0.1 -3.9
nitrogen source casaminos (N) -1.6 -0.9 -0.9 -1.2 -0.0
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.2 -0.4 -0.1 -0.1 -4.2
stress Cisplatin 0.1 mg/ml +0.5 +0.2 +0.5 +0.1 -5.9
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -1.0 -1.1 -1.0 -1.1 +0.1
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -1.1 -1.2 -0.9 -1.0 +0.1
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +0.4 +0.1 -0.4 +0.0 -3.9
stress Cisplatin 0.05 mg/ml -0.1 +0.1 +0.4 +0.0 -4.2
stress Cisplatin 0.05 mg/ml +0.1 +0.0 +0.5 -0.1 -3.8
stress Cisplatin 0.05 mg/ml -0.1 -0.3 +0.4 -0.3 -2.9
stress Cisplatin 0.025 mg/ml -0.2 -0.1 +0.5 +0.5 -3.7
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM +0.4 -0.0 +0.5 +0.2 -4.1
stress Cisplatin 0.05 mg/ml +0.1 +0.3 +0.3 -0.2 -3.2
stress Cisplatin 0.1 mg/ml +0.6 -0.4 +0.1 +0.9 -3.6
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