Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b0708	b0709	b0710	b0711	b0712
		phr	ybgH	ybgI	ybgJ	ybgK
phage	T7_phage 0.0015625 MOI TC2	-0.4	-0.3	-0.6	-0.3	-1.4
phage	Phage_N4_cage_3_mouse_4_Cecum_40 hr	-0.0	-0.0	-1.4	-0.8	-0.2
stress	Cisplatin 0.1 mg/ml	-1.1	+0.2	-1.1	+0.0	+0.4
stress	2-Furfuraldehyde 0.25 vol%	+0.0	+0.0	-1.5	-0.3	+0.3
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+0.2	-0.1	-1.5	-0.1	+0.1
phage	T7_phage 0.00015625 MOI TC4	-0.5	+0.0	+0.6	-0.8	-0.3
phage	Δdbn_10	-0.3	+0.5	+0.2	-0.3	-1.0
stress	LB Aerobic with Irgasan 0.0000003125 mM	-0.4	+0.3	-0.7	-0.3	+0.4
phage	RB68	+0.2	-0.2	-0.7	-0.3	+0.1
carbon source	acetate (C)	-0.2	-0.1	-0.9	+0.4	+0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.1	+0.1	-1.0	+0.1	+0.3
carbon source	carbon source D-Glucose 0.25mM	+0.6	+0.1	-0.8	-0.0	-0.3
predation	6 hr rep1_HD100_10fold_dilution_grewON	+0.4	+0.1	-2.0	+0.6	+0.5
carbon source	Dodecanol and Rhamnolipid (C)	-0.5	-0.4	+0.6	-0.5	+0.5
stress	Aluminum chloride 5 mM	+0.4	-0.3	-0.2	-0.4	+0.3
motility	inner cut, LB soft agar motility assay	+0.1	+0.2	-0.7	-0.1	+0.6
motility	inner cut, LB soft agar motility assay	-0.1	-0.1	-0.6	+0.3	+0.6
control	PBS_cage_1_mice _Feces_40 hr	-0.2	+0.2	-0.4	+0.9	+0.0
attachment_assay_attached_sample	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+0.7	+0.2	+0.7	-0.6	-0.3
control	PBS_cage_1_mouse_1_Cecum_40 hr	+0.4	-0.1	+0.4	-0.4	+0.4
stress	LB Anaerobic with Benzethonium chloride 0.00003125 mM	-0.5	+0.1	+0.2	+0.8	+0.2
control	PBS_cage_1_mice _Feces_16 hr	-0.5	-0.0	+0.0	+1.2	+0.1
control	PBS_cage_1_mice _Feces_22 hr	-0.0	+0.3	-0.2	+1.0	-0.1
stress	Ciprofloxacin Hydrochloride 0.0003 mM	-0.3	+0.1	+0.7	+0.1	+0.3
phage	Ste41	-0.1	-0.2	+0.6	+0.3	+0.5
carbon source	carbon source D-Mannose 5mM	+0.2	-0.3	+0.6	+0.7	+0.1
control	PBS_cage_2_mouse_2_Cecum_40 hr	-0.3	+0.2	+0.6	+0.2	+0.8
stress	Trimethoprim 0.00125 mM	-0.1	+0.1	+0.7	+0.6	+0.3
stress	LB Anaerobic with Nitrofurantoin 0.00003125 mM	+0.2	-0.2	+0.5	+0.8	+0.5
carbon source	carbon source D-Glucose 5mM	+0.7	+0.2	+0.9	+0.5	+0.8