Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b0615	b0616	b0617	b0618	b0619
		citF	citE	citD	citC	citA
phage	Ste41	-1.6	-0.6	-2.2	-0.5	-0.5
stress	octanol 0.08 vol%	+0.3	+0.2	-5.1	-0.3	-0.2
carbon source	carbon source D-Mannose 5mM	-1.3	-0.5	-1.6	-0.1	-0.7
phage	Ste41	-0.1	-0.2	-2.3	-0.9	+0.5
stress	LB Aerobic with Phenazine ethosulfate 0.0000625 mM	-0.2	-0.5	-1.7	-0.2	+0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+0.2	-0.5	-1.8	-0.2	+0.0
stress	LB Aerobic with Irgasan 0.0000003125 mM	+0.2	-0.6	-1.2	+0.0	-0.5
phage	phage	-0.6	-0.5	-1.5	-0.3	+0.9
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	-0.9	+0.2	-1.1	-0.3	+0.3
supernatant	LB 0.5x with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-0.3	-1.4	-0.2	+0.2
stress	LB Anaerobic with Benzethonium chloride 0.00003125 mM	-0.7	-0.6	-0.7	-0.7	+1.1
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	-0.1	-0.2	-1.7	-0.3	+0.7
control	PBS_cage_1_mice _Feces_22 hr	+0.2	-0.4	-1.2	-0.3	+0.2
phage	RB68	-0.1	+0.0	+0.6	-0.3	-1.4
stress	LB Aerobic with Trimethoprim 0.00000125 mM	+0.5	+0.0	-1.9	+0.2	+0.1
motility	inner cut, LB soft agar motility assay	+0.2	-0.8	-1.4	+0.6	+0.4
stress	Bacitracin 1 mg/ml	-0.2	+0.3	-1.6	-0.0	+0.9
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.3	+0.3	-1.1	+0.2	+0.4
phage	Δdbn_10	+0.5	+0.3	-0.6	+0.3	-1.0
no stress control anaerobic	M9 no stress control; Anaerobic 48 hr	-0.1	+0.2	+0.7	-0.0	-1.2
phage	T7_phage 0.0015625 MOI TC2	-1.0	+0.2	+0.8	-0.4	+0.0
carbon source	D-Galacturonic Acid (C) M9	+0.7	+0.2	-1.0	+0.2	-0.3
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	+0.1	+0.2	-0.7	-0.5	+0.8
control	PBS_cage_2_mouse_3_Cecum_40 hr	+0.9	-0.1	-1.1	+0.4	+0.0
motility	inner cut, LB soft agar motility assay	-0.2	-0.6	+1.4	-0.2	+0.0
phage	Phage_N4_cage_3_mouse_3_Cecum_40 hr	+0.3	+0.1	-0.9	+0.9	+0.7
stress	Cisplatin 0.1 mg/ml	-0.5	+0.3	+0.7	+0.2	+0.7
stress	LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM	+0.3	+0.2	+1.9	-0.0	-0.3
stress	Nickel (II) chloride 1.5 mM	-0.1	+1.1	+0.8	+0.2	+0.2
stress	Chlorite 1.25 mM	+0.1	+0.6	+1.2	+0.5	+0.1