Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b0577	b0578	b0579	b0580	b0581
		ybdG	nfnB	ybdF	ybdJ	ybdK
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.0	-0.0	-2.2	-1.6	+0.1
carbon source	carbon source D-Mannose 0.5mM	-0.1	+0.1	-0.1	-2.8	-0.1
carbon source	carbon source D-Mannose 1mM	+0.0	-0.0	-1.1	-1.0	-0.7
stress	LB Anaerobic with Benzethonium chloride 0.00003125 mM	+0.2	-0.7	-0.4	-1.5	-0.2
stress	Cisplatin 0.05 mg/ml	-0.8	-0.4	-0.3	-0.7	-0.2
phage	Papa dilution 10-1 cacl2 maltose	-0.4	-0.7	-0.9	+0.1	-0.3
phage	Lambda_ci1857	-0.5	+0.1	-0.2	-1.4	-0.2
predation	6 hr rep1_HD100_10fold_dilution_grewON	+0.0	+0.6	-0.6	-1.7	+0.0
stress	3-methyl-1-butanol 1.25 vol%	-0.2	-0.6	+1.0	-1.3	-0.2
control	PBS_cage_1_mouse_2_Cecum_40 hr	-0.1	-0.3	+0.5	-1.2	-0.3
control	PBS_cage_2_mouse_2_Cecum_40 hr	+0.3	-0.2	-0.4	-1.2	+0.2
stress	Cisplatin 0.1 mg/ml	-0.3	+0.6	-1.2	-0.7	+0.4
stress	LB Aerobic with Oxytetracycline 0.00000125 mM	-0.1	+0.4	+0.4	-1.3	-0.1
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+0.2	+0.5	-0.0	-1.5	+0.2
stress	LB Anaerobic with Cephalothin 0.0000078125 mM	+0.0	+0.4	-1.7	+0.4	+0.1
stress	Cisplatin 0.1 mg/ml	-1.1	-0.4	+0.0	+0.9	-0.1
phage	Ste41	-0.4	-0.4	-1.4	+1.1	+0.7
motility	outer cut, LB soft agar motility assay	+0.2	-0.4	+0.9	-0.5	+0.2
stress	LB Anaerobic with Furaltadone 0.000015625 mM	+0.2	+2.2	-1.0	-1.3	+0.3
stress	2-nitrobenzenesulfonyl fluoride	-0.1	+2.7	-1.2	-1.2	+0.3
carbon source	carbon source D-Glucose 0.25mM	-0.1	+0.4	+1.0	-0.7	+0.1
stress	LB Anaerobic with Furaltadone 0.000015625 mM	-0.0	+1.9	-0.4	-0.6	+0.1
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-0.2	+0.4	-0.5	+1.4	+0.0
motility	inner cut, LB soft agar motility assay	-0.0	+0.3	-0.8	+1.4	+0.6
carbon source	Dodecanol and Rhamnolipid (C)	-0.0	+0.3	+0.4	+1.2	-0.3
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-0.1	-0.4	-0.2	+2.0	+0.3
stress	LB Anaerobic with Nitrofurantoin 0.000015625 mM	+0.1	+0.5	-0.4	+1.3	+0.3
stress	LB Aerobic with Nitrofurantoin 0.00003125 mM	-0.3	+5.9	-2.9	-1.3	+1.1
carbon source	carbon source D-Mannose 0.5mM	+0.1	+0.3	+0.9	+1.4	-0.0
stress	LB Anaerobic with Nitrofurantoin 0.00003125 mM	-0.2	+2.5	-0.7	+0.0	+1.1