Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1193 experiments or choose conditions or try the comparative fitness browser

500 ntylcG and ybcQ are separated by 85 nucleotidesybcQ and nmpC are separated by 189 nucleotidesnmpC and insH-2 are separated by 150 nucleotidesinsH-2 and essD are separated by 1644 nucleotides b4509: ylcG - DLP12 prophage; predicted protein (NCBI), at 572,953 to 573,093 ylcG b0551: ybcQ - DLP12 prophage; predicted antitermination protein (NCBI), at 573,179 to 573,562 ybcQ b0553: nmpC - DLP12 prophage; truncated outer membrane porin (pseudogene) (RefSeq), at 573,752 to 573,809 nmpC b0552: insH-2 - DLP12 prophage; IS5 transposase and trans-activator (NCBI), at 573,960 to 574,976 insH-2 b0554: essD - DLP12 prophage; predicted phage lysis protein (NCBI), at 576,621 to 576,836 essD
Group Condition b4509 b0551 b0553 b0552 b0554
ylcG ybcQ nmpC insH-2 essD
stress LB Aerobic with Ramoplanin 0.000125 mM -4.4 -0.0 -1.1 N.D. +0.2
stress LB Aerobic with Ramoplanin 0.000125 mM -4.4 -0.0 -0.8 N.D. +0.0
stress LB Aerobic with Spiramycin 0.0000625 mM -4.5 -0.1 +0.2 N.D. +0.1
stress LB Anaerobic with Benzethonium chloride 0.000015625 mM -3.8 -0.1 -0.1 N.D. -0.2
retron_ec_48_control retron_Ec_48_control -2.9 -0.1 -0.2 N.D. -0.7
gfp_control GFP_control -2.4 -0.3 -0.1 N.D. -0.6
stress LB Anaerobic with Spiramycin 0.00003125 mM -3.9 +0.1 +0.1 N.D. +0.3
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -3.6 +0.4 -0.7 N.D. +0.8
stress LB Anaerobic with Spiramycin 0.000125 mM -3.7 +0.2 +0.2 N.D. +0.2
stress LB Anaerobic with Ramoplanin 0.0000625 mM -3.4 +0.1 +0.2 N.D. +0.1
gfp_control GFP_control -1.8 -0.2 -0.5 N.D. -0.4
drt_type_3 DRT_type_3 -1.6 -0.2 -0.4 N.D. -0.8
stress LB Anaerobic with Novobiocin 0.00003125 mM -2.9 +0.1 +0.0 N.D. -0.2
stress LB Anaerobic with Ticarcillin 0.00003125 mM -3.0 +0.2 -0.0 N.D. +0.0
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -3.3 +0.3 -0.2 N.D. +0.5
mzaabcde mzaABCDE -1.8 -0.2 -0.3 N.D. -0.4
stress LB Anaerobic with Novobiocin 0.000125 mM -2.5 +0.0 -0.1 N.D. -0.2
stress LB Anaerobic with Novobiocin 0.000125 mM -2.5 -0.0 +0.0 N.D. -0.1
stress LB Aerobic with Spiramycin 0.000125 mM -3.2 +0.1 +0.2 N.D. +0.1
ppi ppI -1.5 -0.1 -0.3 N.D. -0.7
phage Papa dilution 10-1 cacl2 maltose -0.5 -0.5 -0.6 N.D. -1.0
stress LB Anaerobic with Irgasan 0.000000625 mM -2.3 +0.0 +0.0 N.D. -0.2
stress LB Anaerobic with Doxycycline hyclate 0.000000390625 mM -2.7 +0.0 +0.1 N.D. +0.1
stress Benzalkonium Chloride 0.004 mg/ml -2.5 +0.2 +0.4 N.D. -0.4
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM -2.3 +0.0 +0.1 N.D. -0.0
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -2.8 +0.2 -0.1 N.D. +0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -2.2 +0.1 -0.1 N.D. +0.0
stress LB Anaerobic with Spiramycin 0.00003125 mM -2.3 +0.1 +0.2 N.D. +0.0
stress LB Anaerobic with Cephalothin 0.0000078125 mM +4.0 -0.0 -0.5 N.D. -0.5
stress LB Anaerobic with Cephalothin 0.0000078125 mM +4.1 +0.1 -0.1 N.D. -0.6
remove
b4509
plot
remove
b0551
plot
remove
b0553
remove
b0552
plot
remove
b0554
plot