Fitness for 5 genes in Escherichia coli BW25113

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500 ntybaP and ybaQ are separated by 137 nucleotidesybaQ and copA are separated by 315 nucleotidescopA and ybaS are separated by 261 nucleotidesybaS and ybaT are separated by 2 nucleotides b0482: ybaP - hypothetical protein (NCBI), at 506,510 to 507,304 ybaP b0483: ybaQ - orf, hypothetical protein (VIMSS), at 507,442 to 507,783 ybaQ b0484: copA - copper transporter (NCBI), at 508,099 to 510,603 copA b0485: ybaS - predicted glutaminase (NCBI), at 510,865 to 511,797 ybaS b0486: ybaT - predicted transporter (NCBI), at 511,800 to 513,092 ybaT
Group Condition b0482 b0483 b0484 b0485 b0486
ybaP ybaQ copA ybaS ybaT
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +0.0 -0.2 -4.6 -0.2 -0.1
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM -0.1 -0.1 -4.4 +0.0 -0.1
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM +0.2 +0.1 -4.5 -0.2 +0.0
carbon source Glycolic Acid (C) +0.3 -0.7 -3.4 -0.3 +0.1
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.3 -0.2 -4.1 +0.7 +0.0
carbon source Glycolic Acid (C) +0.2 -0.7 -3.4 -0.0 +0.1
stress copper (II) chloride 2 mM -0.0 -0.2 -3.0 -0.2 +0.1
carbon source succinate (C) -0.1 -0.8 -2.1 -0.2 +0.2
stress copper (II) chloride 2 mM +0.2 -0.4 -2.7 +0.1 -0.0
carbon source L-Malic (C) -0.3 -1.0 -1.3 -0.3 +0.2
carbon source succinate (C) -0.1 -0.7 -2.0 -0.1 +0.2
stress copper (II) chloride 2 mM +0.1 -0.0 -2.7 +0.0 +0.1
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.6 -0.8 -0.5 -0.0 -0.3
stress copper (II) chloride 2 mM +0.1 +0.2 -2.4 -0.0 -0.1
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM -0.2 +0.2 -2.0 -0.1 -0.1
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM +0.1 +0.2 -2.3 +0.4 -0.1
stress LB Anaerobic with 2-Mercaptopyridine N-oxide 0.000015625 mM +0.1 -0.0 -1.5 +0.1 -0.2
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr +0.1 -0.0 -1.6 -0.1 +0.1
stress Benzalkonium Chloride 0.004 mg/ml -0.7 -0.1 -0.9 +0.2 -0.1
phage T7_phage 0.0015625 MOI TC2 -0.2 +0.3 -0.3 -0.6 -0.6
stress Aluminum chloride 5 mM -0.4 -0.6 -0.0 -0.8 +0.3
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.4 +0.5 -0.5 -0.4 -0.5
stress LB Anaerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM +0.3 +0.3 -1.6 -0.0 -0.1
stress LB Anaerobic with 2-Mercaptopyridine N-oxide 0.000015625 mM +0.1 +0.2 -1.6 +0.3 +0.0
phage T7_phage 0.00015625 MOI TC4 -0.7 +1.0 -0.7 -0.2 -0.2
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr -0.4 +0.3 -1.2 +0.1 +0.4
control PBS_cage_1_mice _Feces_16 hr -0.2 +0.8 -0.6 +0.3 +0.1
phage TP4 +1.2 -0.5 -0.1 +0.1 +0.2
protonated/deuterated deuterated glucose in H2O +0.4 +0.2 -0.1 +0.7 +0.7
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.3 +0.8 +0.4 +0.3 +0.5
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