Fitness for 5 genes in Escherichia coli BW25113

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500 ntcyoB and cyoA are separated by 21 nucleotidescyoA and ampG are separated by 459 nucleotidesampG and yajG are separated by 43 nucleotidesyajG and bolA are separated by 304 nucleotides b0431: cyoB - cytochrome o ubiquinol oxidase subunit I (NCBI), at 447,874 to 449,865 cyoB b0432: cyoA - cytochrome o ubiquinol oxidase subunit II (NCBI), at 449,887 to 450,834 cyoA b0433: ampG - muropeptide transporter (NCBI), at 451,294 to 452,769 ampG b0434: yajG - putative polymerase/proteinase (VIMSS), at 452,813 to 453,391 yajG b0435: bolA - possible regulator of murein genes (VIMSS), at 453,696 to 454,013 bolA
Group Condition b0431 b0432 b0433 b0434 b0435
cyoB cyoA ampG yajG bolA
stress undecene 5 vol% -5.1 -4.7 +0.1 +0.1 +0.2
stress 2,4-Dinitrophenol 2 mM -4.9 -4.0 -0.3 -0.1 -0.0
stress undecene 5 vol% -5.0 -4.6 +0.1 +0.2 +0.1
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.2 -0.5 -5.2 -4.2 +0.9
stress 2,4-Dinitrophenol 2 mM -4.2 -3.7 -0.3 +0.1 -0.2
stress LB Aerobic with Ramoplanin 0.000125 mM -0.1 -0.6 -4.0 -4.2 +0.6
stress Carbenicillin 0.008 mg/ml -1.7 -1.0 -2.8 -2.4 +0.1
stress LB Aerobic with Ramoplanin 0.000125 mM -0.2 -0.8 -3.5 -3.2 +0.4
stress Carbenicillin 0.004 mg/ml -1.6 -0.8 -2.9 -1.6 -0.0
stress LB Anaerobic with Ticarcillin 0.00003125 mM +0.1 +0.1 -4.6 -2.6 +0.3
stress LB Anaerobic with Cephalothin 0.0000078125 mM +0.3 -0.2 -4.5 -2.6 +0.4
stress hexanol 0.31 vol% -3.8 -2.8 +0.3 -0.3 -0.0
stress LB Aerobic with Irgasan 0.0000003125 mM -2.4 -1.9 -0.4 -2.5 +0.7
stress LB Anaerobic with Penicillin g 0.0000625 mM +0.1 -0.1 -4.8 -1.7 +0.0
stress LB Anaerobic with Azlocillin 0.00003125 mM +0.0 -0.0 -4.4 -2.2 +0.2
stress LB Anaerobic with Ticarcillin 0.00003125 mM -0.0 -0.1 -4.4 -2.2 +0.6
stress Cephalothin 0.01 mg/ml -0.9 +0.3 -3.2 -2.7 +0.4
stress LB Anaerobic with Amoxicillin 0.0000078125 mM +0.1 -0.0 -3.7 -2.6 +0.3
stress 3-methyl-2-butenol 1.25 vol% -3.3 -3.1 +0.0 +0.2 +0.3
stress 3-methyl-2-butenol 1.25 vol% -3.7 -2.6 -0.1 +0.1 +0.4
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +2.7 +3.2 +0.1 -0.2 +0.4
plasmid transformation vcDART vector transformation; agar assay +3.1 +3.4 +0.1 +0.0 +0.3
stress Cisplatin 0.1 mg/ml +3.4 +4.3 +0.0 +0.0 -0.4
plasmid transformation vcDART vector transformation; agar assay +3.5 +4.0 +0.1 +0.0 +0.0
plasmid transformation mariner vector transformation; liquid outgrowth assay +3.8 +4.4 -0.4 +0.1 -0.2
stress Spectinomycin 0.0125 mg/ml +3.9 +4.3 +0.1 -0.1 +0.1
plasmid transformation mariner vector transformation; liquid outgrowth assay +4.0 +4.3 -0.1 +0.0 +0.3
plasmid transformation vcDART vector transformation; liquid outgrowth assay +4.2 +4.9 -0.1 -0.2 -0.1
plasmid transformation vcDART vector transformation; liquid outgrowth assay +4.9 +5.5 -0.0 +0.2 +0.0
plasmid transformation vcDART vector transformation; liquid outgrowth assay +6.1 +7.1 -0.1 -0.3 +0.4
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