Fitness for 5 genes in Escherichia coli BW25113

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500 ntpanD and yadD are separated by 273 nucleotidesyadD and panC are separated by 73 nucleotidespanC and panB are separated by 11 nucleotidespanB and yadC are separated by 113 nucleotides b0131: panD - aspartate 1-decarboxylase precursor (NCBI), at 146,314 to 146,694 panD b0132: yadD - predicted transposase (NCBI), at 146,968 to 147,870 yadD b0133: panC - pantoate--beta-alanine ligase (NCBI), at 147,944 to 148,795 panC b0134: panB - 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI), at 148,807 to 149,601 panB b0135: yadC - predicted fimbrial-like adhesin protein (NCBI), at 149,715 to 150,953 yadC
Group Condition b0131 b0132 b0133 b0134 b0135
panD yadD panC panB yadC
carbon source D-Glucose (C) MOPS -3.0 -0.1 -3.4 -3.3 -0.0
nitrogen source Adenosine (N) -3.1 -0.1 -3.0 -3.3 -0.0
nitrogen source Adenosine (N) -2.3 +0.1 -3.3 -3.0 -0.1
carbon source D-Glucose (C) M9 -3.2 -0.1 -2.9 -2.4 -0.0
nitrogen source D-Serine (N) -2.9 +0.1 -2.6 -2.7 +0.0
nitrogen source D-Serine (N) -2.3 -0.0 -2.6 -2.7 +0.1
nitrogen source D-Alanine (N) -3.4 +0.1 -2.2 -1.9 -0.0
nitrogen source Ammonium chloride (N) -2.5 -0.2 -1.9 -2.5 -0.2
carbon source D-Galacturonic Acid (C) MOPS -2.1 -0.2 -2.8 -1.8 -0.0
nitrogen source D-Alanine (N) -1.7 -0.0 -2.5 -2.0 +0.1
carbon source D-Glucose (C) -1.9 +0.1 -1.8 -1.9 -0.0
carbon source D-Galacturonic Acid (C) M9 -1.7 -0.1 -1.9 -1.8 +0.0
carbon source D-Glucose (C) -1.6 -0.0 -2.0 -1.6 -0.0
nitrogen source Ammonium chloride (N) -1.4 +0.0 -1.7 -1.8 -0.1
nitrogen source casaminos (N) -1.1 -0.1 -1.6 -2.0 +0.1
nitrogen source Cytidine (N) -1.1 -0.1 -1.7 -1.7 -0.0
carbon source NAG (C) -1.6 -0.0 -1.6 -1.4 +0.0
nitrogen source L-Glutamine (N) -1.5 -0.0 -1.5 -1.5 +0.0
nitrogen source Cytidine (N) -0.7 +0.1 -1.6 -2.1 -0.0
carbon source NAG (C) -1.2 -0.0 -1.7 -1.4 +0.1
nitrogen source L-Glutamine (N) -1.2 +0.1 -1.7 -1.4 +0.1
nitrogen source casaminos (N) -1.1 -0.1 -1.4 -1.4 +0.1
protonated/deuterated protonated control -1.7 +0.0 -1.3 -0.9 -0.0
nitrogen source L-Arginine (N) -1.2 +0.0 -1.4 -1.2 -0.1
nitrogen source Glycine (N) -2.0 -0.0 -0.8 -0.8 -0.1
M9 Glucose 2% aerobic -1.1 -0.1 -1.1 -1.0 -0.3
M9 Glucose 2% aerobic -1.0 -0.1 -1.2 -1.0 -0.3
carbon source D-Sorbitol (C) -1.3 +0.0 -1.2 -0.9 +0.0
carbon source D-Maltose (C) -1.2 +0.0 -1.2 -0.9 -0.0
stress LB Aerobic with Irgasan 0.0000003125 mM +2.0 -0.1 +1.3 +1.7 +0.5
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