Fitness for 5 genes in Escherichia coli BW25113

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500 ntyaaJ and talB are separated by 278 nucleotidestalB and mog are separated by 114 nucleotidesmog and yaaH are separated by 34 nucleotidesyaaH and yaaW are separated by 148 nucleotides b0007: yaaJ - predicted transporter (NCBI), at 6,529 to 7,959 yaaJ b0008: talB - transaldolase B (NCBI), at 8,238 to 9,191 talB b0009: mog - molybdenum cofactor biosynthesis protein (NCBI), at 9,306 to 9,893 mog b0010: yaaH - conserved inner membrane protein associated with acetate transport (NCBI), at 9,928 to 10,494 yaaH b0011: yaaW - hypothetical protein (NCBI), at 10,643 to 11,356 yaaW
Group Condition b0007 b0008 b0009 b0010 b0011
yaaJ talB mog yaaH yaaW
stress 2,4-Dinitrophenol 2 mM -0.3 -1.3 -2.0 +0.0 -0.1
stress 2,4-Dinitrophenol 2 mM -0.4 -1.2 -1.9 -0.1 -0.1
stress LB Aerobic with Irgasan 0.0000003125 mM -0.2 -1.1 -1.1 -0.1 -0.5
stress octanol 0.08 vol% +0.3 -1.0 -1.5 -0.1 -0.5
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr -0.7 +0.1 -1.2 -1.0 +0.0
stress LB Anaerobic Allura Red AC 250 uM -0.7 -0.5 -1.2 -0.3 +0.0
phage Phage_N4_cage_3_mice _Feces_40 hr -0.4 -0.2 -1.3 -0.5 -0.2
phage Phage_N4_cage_4_mouse_1_Cecum_40 hr -0.2 -0.5 -1.1 -0.6 -0.1
predation 6 hr rep1_HD100_10fold_dilution_grewON -0.5 -0.7 -0.8 -0.3 -0.2
control PBS_cage_1_mouse_2_Cecum_40 hr -0.3 +0.1 -1.3 -0.5 -0.3
phage T7_phage 0.00015625 MOI TC4 -0.8 -0.9 -0.4 +0.4 -0.3
lb LB, Anaerobic -0.4 +0.1 -1.6 +0.3 -0.3
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM +0.0 +0.6 -1.9 -0.3 +0.1
stress LB Anaerobic with Cephalothin 0.0000078125 mM +0.9 -0.9 -0.9 -0.4 -0.1
stress Bacitracin 1 mg/ml +0.4 -2.0 +0.3 -0.3 +0.2
stress Benzalkonium Chloride 0.004 mg/ml +0.6 -3.4 +2.1 +0.2 -0.7
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.3 -1.1 -0.8 +0.2 +0.2
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.1 -1.7 +0.6 +0.1 -0.0
stress Spectinomycin 0.00625 mg/ml +0.2 -1.8 +1.3 -0.6 -0.2
stress LB Anaerobic with Cephalothin 0.0000078125 mM +1.3 -0.6 -1.4 -0.1 -0.0
phage Ste41 -0.2 -0.5 -0.5 +0.9 -0.3
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.2 +0.8 -1.6 -0.4 +0.6
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.4 -0.6 +0.9 -0.5 -0.6
motility outer cut, LB soft agar motility assay -0.4 -1.7 +2.3 +0.5 -0.7
stress Spectinomycin 0.0125 mg/ml +0.3 -2.7 +2.2 +0.3 -0.1
stress Cisplatin 0.1 mg/ml +0.5 -1.0 +0.9 +0.1 -0.4
motility inner cut, LB soft agar motility assay -0.2 -0.6 +0.9 +0.1 +0.9
motility outer cut, LB soft agar motility assay -0.3 -0.4 +2.1 -0.4 +0.1
stress 2-Furfuraldehyde 0.25 vol% -0.1 +1.5 +0.8 -0.3 +0.2
stress LB Aerobic with Nitrofurantoin 0.00003125 mM -0.0 +2.6 +0.9 +0.5 +0.2
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