Fitness for 5 genes in Escherichia coli BW25113

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500 ntyaaX and yaaA are separated by 152 nucleotidesyaaA and yaaJ are separated by 69 nucleotidesyaaJ and talB are separated by 278 nucleotidestalB and mog are separated by 114 nucleotides b0005: yaaX - hypothetical protein (NCBI), at 5,234 to 5,530 yaaX b0006: yaaA - hypothetical protein (NCBI), at 5,683 to 6,459 yaaA b0007: yaaJ - predicted transporter (NCBI), at 6,529 to 7,959 yaaJ b0008: talB - transaldolase B (NCBI), at 8,238 to 9,191 talB b0009: mog - molybdenum cofactor biosynthesis protein (NCBI), at 9,306 to 9,893 mog
Group Condition b0005 b0006 b0007 b0008 b0009
yaaX yaaA yaaJ talB mog
stress 2,4-Dinitrophenol 2 mM -0.3 -0.1 -0.4 -1.2 -1.9
stress 2,4-Dinitrophenol 2 mM +0.0 -0.1 -0.3 -1.3 -2.0
predation 6 hr rep1_HD100_10fold_dilution_grewON -0.7 -0.6 -0.5 -0.7 -0.8
carbon source carbon source D-Glucose 0.25mM -2.0 -0.3 +0.2 -0.5 -0.3
control PBS_cage_2_mouse_3_Cecum_40 hr -0.4 -0.3 -0.5 -0.2 -1.3
stress LB Aerobic with Irgasan 0.0000003125 mM +0.1 -0.2 -0.2 -1.1 -1.1
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.9 -0.3 -0.1 -0.4 -0.9
stress LB Anaerobic Allura Red AC 250 uM -0.0 -0.1 -0.7 -0.5 -1.2
stress Bacitracin 1 mg/ml -0.6 -0.4 +0.4 -2.0 +0.3
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.5 -0.1 +0.3 -1.1 -0.8
stress octanol 0.08 vol% -0.0 +0.6 +0.3 -1.0 -1.5
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.3 -0.2 +0.9 -0.9 -0.9
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.2 +0.0 -0.1 -1.7 +0.6
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM +0.3 -0.4 -0.1 +0.4 -1.5
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM +0.0 +0.0 +0.0 +0.6 -1.9
phage T7_phage 0.00015625 MOI TC4 +0.4 +0.5 -0.8 -0.9 -0.4
stress LB Anaerobic with Furaltadone 0.000015625 mM -0.3 +0.0 +0.2 +0.8 -1.6
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.2 +0.1 +1.3 -0.6 -1.4
motility outer cut, LB soft agar motility assay +0.0 -0.8 -0.4 -1.7 +2.3
stress Spectinomycin 0.0125 mg/ml -0.1 -0.1 +0.3 -2.7 +2.2
stress Benzalkonium Chloride 0.004 mg/ml +0.3 +0.2 +0.6 -3.4 +2.1
stress Spectinomycin 0.00625 mg/ml +0.3 -0.1 +0.2 -1.8 +1.3
motility outer cut, LB soft agar motility assay -0.9 -0.2 -0.3 -0.2 +1.6
stress Cisplatin 0.1 mg/ml +0.6 -0.4 +0.5 -1.0 +0.9
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +1.0 -0.4 -0.3 +1.2 -0.3
motility outer cut, LB soft agar motility assay +0.5 -0.3 -0.3 -0.4 +2.1
carbon source Glycolic Acid (C) +0.4 -0.2 +0.5 +1.2 -0.3
stress 2-Furfuraldehyde 0.25 vol% -0.2 -0.1 -0.1 +1.5 +0.8
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM -0.2 +0.4 +0.4 +1.3 +0.4
stress LB Aerobic with Nitrofurantoin 0.00003125 mM -0.0 -0.1 -0.0 +2.6 +0.9
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