Gene info for PfGW456L13_5112 in Pseudomonas fluorescens GW456-L13

Annotation: tmRNA-binding protein SmpB
Type 1: Protein-coding gene
Located on scaffold scaffold1/0|quiver|pilon, + strand, nucleotides 5,702,698 to 5,703,180
See nucleotide sequence around PfGW456L13_5112 or for all of scaffold scaffold1/0|quiver|pilon

Other databases: uniprot: A0A0F4TX28

Nearby Genes

500 ntPfGW456L13_5107 and PfGW456L13_5108 are separated by 97 nucleotidesPfGW456L13_5108 and PfGW456L13_5109 are separated by 61 nucleotidesPfGW456L13_5109 and PfGW456L13_5110 are separated by 4 nucleotidesPfGW456L13_5110 and PfGW456L13_5111 are separated by 7 nucleotidesPfGW456L13_5111 and PfGW456L13_5112 are separated by 229 nucleotidesPfGW456L13_5112 and PfGW456L13_5113 are separated by 115 nucleotidesPfGW456L13_5113 and PfGW456L13_5114 are separated by 261 nucleotidesPfGW456L13_5114 and PfGW456L13_5115 are separated by 150 nucleotidesPfGW456L13_5115 and PfGW456L13_5116 overlap by 4 nucleotidesPfGW456L13_5116 and PfGW456L13_5117 overlap by 4 nucleotides PfGW456L13_5107 - Ferric uptake regulation protein FUR, at 5,699,336 to 5,699,740 _5107 PfGW456L13_5108 - Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex, at 5,699,838 to 5,700,365 _5108 PfGW456L13_5109 - UPF0125 protein yfjF, at 5,700,427 to 5,700,729 _5109 PfGW456L13_5110 - Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W, at 5,700,734 to 5,701,168 _5110 PfGW456L13_5111 - Sodium-dependent transporter family protein, at 5,701,176 to 5,702,468 _5111 PfGW456L13_5112 - tmRNA-binding protein SmpB, at 5,702,698 to 5,703,180 _5112 PfGW456L13_5113 - Lactate-responsive regulator LldR in Enterobacteria, GntR family, at 5,703,296 to 5,704,063 _5113 PfGW456L13_5114 - L-lactate permease, at 5,704,325 to 5,706,019 _5114 PfGW456L13_5115 - Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE, at 5,706,170 to 5,706,994 _5115 PfGW456L13_5116 - Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF, at 5,706,991 to 5,708,448 _5116 PfGW456L13_5117 - Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG, at 5,708,445 to 5,709,116 _5117
Locus Name Description Strand Phenotype
PfGW456L13_5107 Ferric uptake regulation protein FUR - no data
PfGW456L13_5108 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex + no data
PfGW456L13_5109 UPF0125 protein yfjF - insig.
PfGW456L13_5110 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W - no data
PfGW456L13_5111 Sodium-dependent transporter family protein - insig.
PfGW456L13_5112 tmRNA-binding protein SmpB + insig.
PfGW456L13_5113 Lactate-responsive regulator LldR in Enterobacteria, GntR family - strong
PfGW456L13_5114 L-lactate permease + strong
PfGW456L13_5115 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE + strong
PfGW456L13_5116 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF + strong
PfGW456L13_5117 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG + strong

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