Gene info for PfGW456L13_3505 in Pseudomonas fluorescens GW456-L13

Updated annotation (from data): uridine/cytosine permease
Rationale: Specific phenotype: utilization of Cytosine, Uridine; 39% identical to nucleobase transporter A8J166
Original annotation: Possible pyrimidine permease in reductive pathway
Type 1: Protein-coding gene
Located on scaffold scaffold1/0|quiver|pilon, - strand, nucleotides 3,943,800 to 3,945,284
See nucleotide sequence around PfGW456L13_3505 or for all of scaffold scaffold1/0|quiver|pilon

Other databases: uniprot: A0A293QRN3

Nearby Genes

500 ntPfGW456L13_3500 and PfGW456L13_3501 are separated by 143 nucleotidesPfGW456L13_3501 and PfGW456L13_3502 are separated by 3 nucleotidesPfGW456L13_3502 and PfGW456L13_3503 are separated by 94 nucleotidesPfGW456L13_3503 and PfGW456L13_3504 overlap by 36 nucleotidesPfGW456L13_3504 and PfGW456L13_3505 overlap by 17 nucleotidesPfGW456L13_3505 and PfGW456L13_3506 are separated by 553 nucleotidesPfGW456L13_3506 and PfGW456L13_3507 are separated by 162 nucleotidesPfGW456L13_3507 and PfGW456L13_3508 are separated by 0 nucleotidesPfGW456L13_3508 and PfGW456L13_3509 are separated by 142 nucleotidesPfGW456L13_3509 and PfGW456L13_3510 are separated by 393 nucleotides PfGW456L13_3500 - Sensory box transcriptional regulator, LuxR family, at 3,940,181 to 3,940,798 _3500 PfGW456L13_3501 - RNA polymerase sigma-70 factor, ECF subfamily, at 3,940,942 to 3,941,835 _3501 PfGW456L13_3502 - 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein, at 3,941,839 to 3,942,273 _3502 PfGW456L13_3503 - Beta-ureidopropionase (EC 3.5.1.6) (from data), at 3,942,368 to 3,943,651 _3503 PfGW456L13_3504 - hypothetical protein, at 3,943,616 to 3,943,816 _3504 PfGW456L13_3505 - uridine/cytosine permease (from data), at 3,943,800 to 3,945,284 _3505 PfGW456L13_3506 - Dihydropyrimidinase (EC 3.5.2.2) (from data), at 3,945,838 to 3,947,277 _3506 PfGW456L13_3507 - Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism, at 3,947,440 to 3,948,807 _3507 PfGW456L13_3508 - Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data), at 3,948,808 to 3,950,082 _3508 PfGW456L13_3509 - Transcriptional regulator RutR of pyrimidine catabolism (TetR family), at 3,950,225 to 3,950,845 _3509 PfGW456L13_3510 - Aldose 1-epimerase, at 3,951,239 to 3,952,129 _3510
Locus Name Description Strand Phenotype
PfGW456L13_3500 Sensory box transcriptional regulator, LuxR family - insig.
PfGW456L13_3501 RNA polymerase sigma-70 factor, ECF subfamily - insig.
PfGW456L13_3502 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein - insig.
PfGW456L13_3503 Beta-ureidopropionase (EC 3.5.1.6) (from data) - strong
PfGW456L13_3504 hypothetical protein + no data
PfGW456L13_3505 uridine/cytosine permease (from data) - strong
PfGW456L13_3506 Dihydropyrimidinase (EC 3.5.2.2) (from data) + strong
PfGW456L13_3507 Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism + strong
PfGW456L13_3508 Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) + strong
PfGW456L13_3509 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) - insig.
PfGW456L13_3510 Aldose 1-epimerase + insig.

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