Gene info for PfGW456L13_1170 in Pseudomonas fluorescens GW456-L13

Updated annotation (from data): 5-aminopentanamidase (EC 3.5.1.30)
Rationale: Specifically important for utilizing L-Lysine. Automated validation from mutant phenotype: the predicted function (5-AMINOPENTANAMIDASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: 5-aminopentanamidase (EC 3.5.1.30)
Type 1: Protein-coding gene
Located on scaffold scaffold1/0|quiver|pilon, - strand, nucleotides 1,300,884 to 1,301,678
See nucleotide sequence around PfGW456L13_1170 or for all of scaffold scaffold1/0|quiver|pilon

Other databases: uniprot: A0A293QJC6

Nearby Genes

500 ntPfGW456L13_1165 and PfGW456L13_1166 overlap by 8 nucleotidesPfGW456L13_1166 and PfGW456L13_1167 overlap by 4 nucleotidesPfGW456L13_1167 and PfGW456L13_1168 are separated by 124 nucleotidesPfGW456L13_1168 and PfGW456L13_1169 are separated by 314 nucleotidesPfGW456L13_1169 and PfGW456L13_1170 are separated by 38 nucleotidesPfGW456L13_1170 and PfGW456L13_1171 are separated by 12 nucleotidesPfGW456L13_1171 and PfGW456L13_1172 are separated by 222 nucleotidesPfGW456L13_1172 and PfGW456L13_1173 are separated by 185 nucleotidesPfGW456L13_1173 and PfGW456L13_1174 are separated by 193 nucleotidesPfGW456L13_1174 and PfGW456L13_1175 are separated by 15 nucleotides PfGW456L13_1165 - Coenzyme PQQ synthesis protein E, at 1,294,897 to 1,296,048 _1165 PfGW456L13_1166 - Coenzyme PQQ synthesis protein D, at 1,296,041 to 1,296,316 _1166 PfGW456L13_1167 - Pyrroloquinoline-quinone synthase (EC 1.3.3.11), at 1,296,313 to 1,297,065 _1167 PfGW456L13_1168 - Coenzyme PQQ synthesis protein B, at 1,297,190 to 1,298,101 _1168 PfGW456L13_1169 - Coenzyme PQQ synthesis protein F, at 1,298,416 to 1,300,845 _1169 PfGW456L13_1170 - 5-aminopentanamidase (EC 3.5.1.30) (from data), at 1,300,884 to 1,301,678 _1170 PfGW456L13_1171 - Lysine 2-monooxygenase (EC 1.13.12.2) (from data), at 1,301,691 to 1,303,373 _1171 PfGW456L13_1172 - Transcriptional regulator, AsnC family, at 1,303,596 to 1,304,057 _1172 PfGW456L13_1173 - Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25), at 1,304,243 to 1,306,597 _1173 PfGW456L13_1174 - hypothetical protein, at 1,306,791 to 1,307,459 _1174 PfGW456L13_1175 - hypothetical protein, at 1,307,475 to 1,307,903 _1175
Locus Name Description Strand Phenotype
PfGW456L13_1165 Coenzyme PQQ synthesis protein E - insig.
PfGW456L13_1166 Coenzyme PQQ synthesis protein D - insig.
PfGW456L13_1167 Pyrroloquinoline-quinone synthase (EC 1.3.3.11) - insig.
PfGW456L13_1168 Coenzyme PQQ synthesis protein B - insig.
PfGW456L13_1169 Coenzyme PQQ synthesis protein F - strong
PfGW456L13_1170 5-aminopentanamidase (EC 3.5.1.30) (from data) - strong
PfGW456L13_1171 Lysine 2-monooxygenase (EC 1.13.12.2) (from data) - strong
PfGW456L13_1172 Transcriptional regulator, AsnC family - strong
PfGW456L13_1173 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.99.25) + insig.
PfGW456L13_1174 hypothetical protein + insig.
PfGW456L13_1175 hypothetical protein - insig.

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