Gene info for PagCFBP13516_RS09845 in Pantoea agglomerans CFBP13505 P0401

Name: rhaS
Annotation: HTH-type transcriptional activator RhaS
Type 1: Protein-coding gene
Located on scaffold NZ_CM143256, - strand, nucleotides 2,109,488 to 2,110,309
See nucleotide sequence around PagCFBP13516_RS09845 or for all of scaffold NZ_CM143256

Other databases: NCBI, other: PagCFBP13505_RS06470

Nearby Genes

500 ntPagCFBP13516_RS09820 and PagCFBP13516_RS09825 are separated by 3 nucleotidesPagCFBP13516_RS09825 and PagCFBP13516_RS09830 are separated by 43 nucleotidesPagCFBP13516_RS09830 and rhaT are separated by 359 nucleotidesrhaT and rhaR are separated by 347 nucleotidesrhaR and rhaS are separated by 11 nucleotidesrhaS and rhaB are separated by 291 nucleotidesrhaB and PagCFBP13516_RS09855 overlap by 8 nucleotidesPagCFBP13516_RS09855 and rhaD are separated by 10 nucleotidesrhaD and rhaM overlap by 11 nucleotidesrhaM and PagCFBP13516_RS09870 are separated by 47 nucleotides PagCFBP13516_RS09820: PagCFBP13516_RS09820 - DksA/TraR family C4-type zinc finger protein, at 2,106,136 to 2,106,402 _RS09820 PagCFBP13516_RS09825: PagCFBP13516_RS09825 - YoaK family small membrane protein, at 2,106,406 to 2,106,504 _RS09825 PagCFBP13516_RS09830: PagCFBP13516_RS09830 - hypothetical protein, at 2,106,548 to 2,106,871 _RS09830 PagCFBP13516_RS09835: rhaT - L-rhamnose/proton symporter RhaT, at 2,107,231 to 2,108,265 rhaT PagCFBP13516_RS09840: rhaR - HTH-type transcriptional activator RhaR, at 2,108,613 to 2,109,476 rhaR PagCFBP13516_RS09845: rhaS - HTH-type transcriptional activator RhaS, at 2,109,488 to 2,110,309 rhaS PagCFBP13516_RS09850: rhaB - rhamnulokinase, at 2,110,601 to 2,112,073 rhaB PagCFBP13516_RS09855: PagCFBP13516_RS09855 - L-rhamnose isomerase, at 2,112,066 to 2,113,322 _RS09855 PagCFBP13516_RS09860: rhaD - rhamnulose-1-phosphate aldolase, at 2,113,333 to 2,114,175 rhaD PagCFBP13516_RS09865: rhaM - L-rhamnose mutarotase, at 2,114,165 to 2,114,479 rhaM PagCFBP13516_RS09870: PagCFBP13516_RS09870 - TetR/AcrR family transcriptional regulator, at 2,114,527 to 2,115,177 _RS09870
Locus Name Description Strand Phenotype
PagCFBP13516_RS09820 PagCFBP13516_RS09820 DksA/TraR family C4-type zinc finger protein + cofit
PagCFBP13516_RS09825 PagCFBP13516_RS09825 YoaK family small membrane protein - no data
PagCFBP13516_RS09830 PagCFBP13516_RS09830 hypothetical protein - cofit
PagCFBP13516_RS09835 rhaT L-rhamnose/proton symporter RhaT + cofit
PagCFBP13516_RS09840 rhaR HTH-type transcriptional activator RhaR - cofit
PagCFBP13516_RS09845 rhaS HTH-type transcriptional activator RhaS - cofit
PagCFBP13516_RS09850 rhaB rhamnulokinase + insig.
PagCFBP13516_RS09855 PagCFBP13516_RS09855 L-rhamnose isomerase + insig.
PagCFBP13516_RS09860 rhaD rhamnulose-1-phosphate aldolase + cofit
PagCFBP13516_RS09865 rhaM L-rhamnose mutarotase + cofit
PagCFBP13516_RS09870 PagCFBP13516_RS09870 TetR/AcrR family transcriptional regulator - cofit

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