Gene info for PagCFBP13516_RS05140 in Pantoea agglomerans CFBP13505 P0401

Name: rpoE
Annotation: RNA polymerase sigma factor RpoE
Type 1: Protein-coding gene
Located on scaffold NZ_CM143256, + strand, nucleotides 1,072,044 to 1,072,622
See nucleotide sequence around PagCFBP13516_RS05140 or for all of scaffold NZ_CM143256

Other databases: NCBI, other: PagCFBP13505_RS14740

Nearby Genes

500 ntung and grcA are separated by 242 nucleotidesgrcA and srmB are separated by 217 nucleotidessrmB and trmN are separated by 165 nucleotidestrmN and nadB overlap by 16 nucleotidesnadB and rpoE are separated by 415 nucleotidesrpoE and rseA are separated by 27 nucleotidesrseA and rseB overlap by 1 nucleotidesrseB and rseC overlap by 4 nucleotidesrseC and lepA are separated by 218 nucleotideslepA and lepB are separated by 9 nucleotides PagCFBP13516_RS05115: ung - uracil-DNA glycosylase, at 1,066,257 to 1,066,937 ung PagCFBP13516_RS05120: grcA - autonomous glycyl radical cofactor GrcA, at 1,067,180 to 1,067,563 grcA PagCFBP13516_RS05125: srmB - ATP-dependent RNA helicase SrmB, at 1,067,781 to 1,069,109 srmB PagCFBP13516_RS05130: trmN - tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN, at 1,069,275 to 1,070,024 trmN PagCFBP13516_RS05135: nadB - L-aspartate oxidase, at 1,070,009 to 1,071,628 nadB PagCFBP13516_RS05140: rpoE - RNA polymerase sigma factor RpoE, at 1,072,044 to 1,072,622 rpoE PagCFBP13516_RS05145: rseA - anti-sigma-E factor RseA, at 1,072,650 to 1,073,303 rseA PagCFBP13516_RS05150: rseB - sigma-E factor regulatory protein RseB, at 1,073,303 to 1,074,259 rseB PagCFBP13516_RS05155: rseC - SoxR-reducing system protein RseC, at 1,074,256 to 1,074,720 rseC PagCFBP13516_RS05160: lepA - translation elongation factor 4, at 1,074,939 to 1,076,738 lepA PagCFBP13516_RS05165: lepB - signal peptidase I, at 1,076,748 to 1,077,722 lepB
Locus Name Description Strand Phenotype
PagCFBP13516_RS05115 ung uracil-DNA glycosylase - insig.
PagCFBP13516_RS05120 grcA autonomous glycyl radical cofactor GrcA + cofit
PagCFBP13516_RS05125 srmB ATP-dependent RNA helicase SrmB - strong
PagCFBP13516_RS05130 trmN tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN + insig.
PagCFBP13516_RS05135 nadB L-aspartate oxidase - cofit
PagCFBP13516_RS05140 rpoE RNA polymerase sigma factor RpoE + no data
PagCFBP13516_RS05145 rseA anti-sigma-E factor RseA + no data
PagCFBP13516_RS05150 rseB sigma-E factor regulatory protein RseB + cofit
PagCFBP13516_RS05155 rseC SoxR-reducing system protein RseC + no data
PagCFBP13516_RS05160 lepA translation elongation factor 4 + cofit
PagCFBP13516_RS05165 lepB signal peptidase I + no data

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