Gene info for PagCFBP13516_RS04335 in Pantoea agglomerans CFBP13505 P0401

Name: truC
Annotation: tRNA pseudouridine(65) synthase TruC
Type 1: Protein-coding gene
Located on scaffold NZ_CM143256, + strand, nucleotides 899,512 to 900,291
See nucleotide sequence around PagCFBP13516_RS04335 or for all of scaffold NZ_CM143256

Other databases: NCBI, other: PagCFBP13505_RS16905

Nearby Genes

500 ntxni and ppnN are separated by 34 nucleotidesppnN and queF are separated by 169 nucleotidesqueF and syd are separated by 62 nucleotidessyd and PagCFBP13516_RS04330 are separated by 587 nucleotidesPagCFBP13516_RS04330 and truC overlap by 1 nucleotidestruC and PagCFBP13516_RS04340 are separated by 12 nucleotidesPagCFBP13516_RS04340 and garD are separated by 78 nucleotidesgarD and PagCFBP13516_RS04350 are separated by 574 nucleotidesPagCFBP13516_RS04350 and PagCFBP13516_RS04355 overlap by 4 nucleotidesPagCFBP13516_RS04355 and gudD are separated by 10 nucleotides PagCFBP13516_RS04310: xni - flap endonuclease Xni, at 894,815 to 895,570 xni PagCFBP13516_RS04315: ppnN - nucleotide 5'-monophosphate nucleosidase PpnN, at 895,605 to 896,969 ppnN PagCFBP13516_RS04320: queF - NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, at 897,139 to 897,984 queF PagCFBP13516_RS04325: syd - SecY-interacting protein, at 898,047 to 898,595 syd PagCFBP13516_RS04330: PagCFBP13516_RS04330 - YqcC family protein, at 899,183 to 899,512 _RS04330 PagCFBP13516_RS04335: truC - tRNA pseudouridine(65) synthase TruC, at 899,512 to 900,291 truC PagCFBP13516_RS04340: PagCFBP13516_RS04340 - flavodoxin, at 900,304 to 900,750 _RS04340 PagCFBP13516_RS04345: garD - galactarate dehydratase, at 900,829 to 902,388 garD PagCFBP13516_RS04350: PagCFBP13516_RS04350 - MFS transporter, at 902,963 to 904,324 _RS04350 PagCFBP13516_RS04355: PagCFBP13516_RS04355 - enolase C-terminal domain-like protein, at 904,321 to 905,667 _RS04355 PagCFBP13516_RS04360: gudD - glucarate dehydratase, at 905,678 to 907,009 gudD
Locus Name Description Strand Phenotype
PagCFBP13516_RS04310 xni flap endonuclease Xni - cofit
PagCFBP13516_RS04315 ppnN nucleotide 5'-monophosphate nucleosidase PpnN - cofit
PagCFBP13516_RS04320 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF - cofit
PagCFBP13516_RS04325 syd SecY-interacting protein + cofit
PagCFBP13516_RS04330 PagCFBP13516_RS04330 YqcC family protein + cofit
PagCFBP13516_RS04335 truC tRNA pseudouridine(65) synthase TruC + cofit
PagCFBP13516_RS04340 PagCFBP13516_RS04340 flavodoxin + cofit
PagCFBP13516_RS04345 garD galactarate dehydratase - insig.
PagCFBP13516_RS04350 PagCFBP13516_RS04350 MFS transporter + cofit
PagCFBP13516_RS04355 PagCFBP13516_RS04355 enolase C-terminal domain-like protein + cofit
PagCFBP13516_RS04360 gudD glucarate dehydratase + cofit

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