Gene info for PagCFBP13505_RS12225 in Pantoea agglomerans CFBP13505 P0401

Annotation: RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_QFZW01000008, + strand, nucleotides 52,467 to 52,967
See nucleotide sequence around PagCFBP13505_RS12225 or for all of scaffold NZ_QFZW01000008

Other databases: NCBI

Nearby Genes

500 ntPagCFBP13505_RS12200 and PagCFBP13505_RS12205 are separated by 281 nucleotidesPagCFBP13505_RS12205 and PagCFBP13505_RS12210 are separated by 633 nucleotidesPagCFBP13505_RS12210 and PagCFBP13505_RS12215 are separated by 108 nucleotidesPagCFBP13505_RS12215 and PagCFBP13505_RS12220 are separated by 143 nucleotidesPagCFBP13505_RS12220 and PagCFBP13505_RS12225 are separated by 36 nucleotidesPagCFBP13505_RS12225 and PagCFBP13505_RS12230 overlap by 4 nucleotidesPagCFBP13505_RS12230 and PagCFBP13505_RS12235 are separated by 26 nucleotidesPagCFBP13505_RS12235 and PagCFBP13505_RS12240 are separated by 698 nucleotidesPagCFBP13505_RS12240 and PagCFBP13505_RS12245 are separated by 1 nucleotidesPagCFBP13505_RS12245 and PagCFBP13505_RS12250 overlap by 4 nucleotides PagCFBP13505_RS12200: PagCFBP13505_RS12200 - hemolysin, at 48,098 to 48,301 _RS12200 PagCFBP13505_RS12205: PagCFBP13505_RS12205 - PACE efflux transporter, at 48,583 to 48,984 _RS12205 PagCFBP13505_RS12210: PagCFBP13505_RS12210 - LacI family transcriptional regulator, at 49,618 to 50,628 _RS12210 PagCFBP13505_RS12215: PagCFBP13505_RS12215 - oxidoreductase, at 50,737 to 51,750 _RS12215 PagCFBP13505_RS12220: PagCFBP13505_RS12220 - tetratricopeptide repeat protein, at 51,894 to 52,430 _RS12220 PagCFBP13505_RS12225: PagCFBP13505_RS12225 - RNA polymerase sigma factor, at 52,467 to 52,967 _RS12225 PagCFBP13505_RS12230: PagCFBP13505_RS12230 - hypothetical protein, at 52,964 to 53,755 _RS12230 PagCFBP13505_RS12235: PagCFBP13505_RS12235 - YceI family protein, at 53,782 to 54,360 _RS12235 PagCFBP13505_RS12240: PagCFBP13505_RS12240 - UDP-4-amino-4-deoxy-L-arabinose aminotransferase, at 55,059 to 56,195 _RS12240 PagCFBP13505_RS12245: PagCFBP13505_RS12245 - undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 56,197 to 57,180 _RS12245 PagCFBP13505_RS12250: PagCFBP13505_RS12250 - bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA, at 57,177 to 59,156 _RS12250
Locus Name Description Strand Phenotype
PagCFBP13505_RS12200 PagCFBP13505_RS12200 hemolysin - cofit
PagCFBP13505_RS12205 PagCFBP13505_RS12205 PACE efflux transporter - cofit
PagCFBP13505_RS12210 PagCFBP13505_RS12210 LacI family transcriptional regulator - cofit
PagCFBP13505_RS12215 PagCFBP13505_RS12215 oxidoreductase + cofit
PagCFBP13505_RS12220 PagCFBP13505_RS12220 tetratricopeptide repeat protein + cofit
PagCFBP13505_RS12225 PagCFBP13505_RS12225 RNA polymerase sigma factor + cofit
PagCFBP13505_RS12230 PagCFBP13505_RS12230 hypothetical protein + cofit
PagCFBP13505_RS12235 PagCFBP13505_RS12235 YceI family protein - cofit
PagCFBP13505_RS12240 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase + cofit
PagCFBP13505_RS12245 PagCFBP13505_RS12245 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase + cofit
PagCFBP13505_RS12250 PagCFBP13505_RS12250 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA + cofit

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