Gene info for PP_4038 in Pseudomonas putida KT2440

Updated annotation (from data): Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2)
Rationale: Specific phenotype: utilization of 3-aminobutyric acid, Uracil. The phenotype on 3-aminobutyrate is not explained
Original annotation: NADP-dependent dihydropyrimidine dehydrogenase subunit PreA
Type 1: Protein-coding gene
Located on scaffold AE015451, + strand, nucleotides 4,550,632 to 4,551,906
See nucleotide sequence around PP_4038 or for all of scaffold AE015451

Other databases: NCBI, uniprot: Q88FQ0

Nearby Genes

500 ntPP_4033 and PP_4034 overlap by 4 nucleotidesPP_4034 and PP_4035 are separated by 49 nucleotidesPP_4035 and PP_4036 are separated by 343 nucleotidesPP_4036 and PP_4037 are separated by 135 nucleotidesPP_4037 and PP_4038 are separated by 0 nucleotidesPP_4038 and PP_4039 are separated by 180 nucleotidesPP_4039 and PP_4040 are separated by 97 nucleotidesPP_4040 and PP_4041 are separated by 66 nucleotidesPP_4041 and PP_4042 are separated by 65 nucleotidesPP_4042 and PP_4043 overlap by 4 nucleotides PP_4033: PP_4033 - Ribonuclease Z, at 4,543,566 to 4,544,525 _4033 PP_4034: PP_4034 - N-carbamoyl-beta-alanine amidohydrolase/allantoine amidohydrolase 2, at 4,544,522 to 4,545,805 _4034 PP_4035: PP_4035 - putative PydP transporter, NCS1 nucleoside transporter family, at 4,545,855 to 4,547,345 _4035 PP_4036: PP_4036 - D-hydantoinase/dihydropyrimidinase, at 4,547,689 to 4,549,128 _4036 PP_4037: PP_4037 - NADP-dependent dihydropyrimidine dehydrogenase subunit, at 4,549,264 to 4,550,631 _4037 PP_4038: PP_4038 - Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data), at 4,550,632 to 4,551,906 _4038 PP_4039: PP_4039 - transcriptional regulator, TetR family, at 4,552,087 to 4,552,608 _4039 PP_4040: PP_4040 - putative enzyme of the glyoxalase family, at 4,552,706 to 4,553,062 _4040 PP_4041: PP_4041 - putative glycoside hydrolase, at 4,553,129 to 4,554,925 _4041 PP_4042: PP_4042 - glucose-6-phosphate 1-dehydrogenase, at 4,554,991 to 4,556,496 _4042 PP_4043: PP_4043 - putative 6-phosphogluconate dehydrogenase, decarboxylating, at 4,556,493 to 4,557,476 _4043
Locus Name Description Strand Phenotype
PP_4033 PP_4033 Ribonuclease Z + insig.
PP_4034 PP_4034 N-carbamoyl-beta-alanine amidohydrolase/allantoine amidohydrolase 2 - sig.
PP_4035 PP_4035 putative PydP transporter, NCS1 nucleoside transporter family - sig.
PP_4036 PP_4036 D-hydantoinase/dihydropyrimidinase + strong
PP_4037 PP_4037 NADP-dependent dihydropyrimidine dehydrogenase subunit + strong
PP_4038 PP_4038 Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) + strong
PP_4039 PP_4039 transcriptional regulator, TetR family - insig.
PP_4040 PP_4040 putative enzyme of the glyoxalase family - insig.
PP_4041 PP_4041 putative glycoside hydrolase - insig.
PP_4042 PP_4042 glucose-6-phosphate 1-dehydrogenase - insig.
PP_4043 PP_4043 putative 6-phosphogluconate dehydrogenase, decarboxylating - insig.

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