Gene info for PP_3948 in Pseudomonas putida KT2440

Updated annotation (from data): nicotinate dehydrogenase subunit B (EC 1.17.2.1)
Rationale: Specific phenotype: utilization of Nicotinic Acid. Also known as nicotinate hydroxylase
Original annotation: nicotinate dehydrogenase subunit B
Type 1: Protein-coding gene
Located on scaffold AE015451, + strand, nucleotides 4,450,397 to 4,453,960
See nucleotide sequence around PP_3948 or for all of scaffold AE015451

Other databases: NCBI, uniprot: Q88FX8

Nearby Genes

500 ntPP_3943 and PP_3944 overlap by 4 nucleotidesPP_3944 and PP_3945 are separated by 321 nucleotidesPP_3945 and PP_3946 are separated by 70 nucleotidesPP_3946 and PP_3947 are separated by 441 nucleotidesPP_3947 and PP_3948 overlap by 4 nucleotidesPP_3948 and PP_3949 are separated by 3 nucleotidesPP_3949 and PP_3950 are separated by 204 nucleotidesPP_3950 and PP_3951 are separated by 378 nucleotidesPP_3951 and PP_3952 are separated by 8 nucleotidesPP_3952 and PP_3953 are separated by 267 nucleotides PP_3943: PP_3943 - N-formylmaleamate deformylase, at 4,445,613 to 4,446,419 _3943 PP_3944: PP_3944 - 6-hydroxynicotinate 3-monooxygenase, at 4,446,416 to 4,447,564 _3944 PP_3945: PP_3945 - 2,5-dihydroxypyridine 5,6-dioxygenase, at 4,447,886 to 4,448,938 _3945 PP_3946: PP_3946 - HTH-type transcriptional repressor NicR, at 4,449,009 to 4,449,485 _3946 PP_3947: PP_3947 - nicotinate dehydrogenase subunit A, at 4,449,927 to 4,450,400 _3947 PP_3948: PP_3948 - nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data), at 4,450,397 to 4,453,960 _3948 PP_3949: PP_3949 - HTH-type transcriptional repressor NicS, at 4,453,964 to 4,454,602 _3949 PP_3950: PP_3950 - Methyl-accepting chemotaxis transducer, at 4,454,807 to 4,456,984 _3950 PP_3951: PP_3951 - 3-oxoadipate CoA-transferase subunit A, at 4,457,363 to 4,458,058 _3951 PP_3952: PP_3952 - 3-oxoadipate CoA-transferase subunit A, at 4,458,067 to 4,458,708 _3952 PP_3953: PP_3953 - potassium transporter, at 4,458,976 to 4,460,430 _3953
Locus Name Description Strand Phenotype
PP_3943 PP_3943 N-formylmaleamate deformylase - sig.
PP_3944 PP_3944 6-hydroxynicotinate 3-monooxygenase - sig.
PP_3945 PP_3945 2,5-dihydroxypyridine 5,6-dioxygenase + sig.
PP_3946 PP_3946 HTH-type transcriptional repressor NicR + strong
PP_3947 PP_3947 nicotinate dehydrogenase subunit A + sig.
PP_3948 PP_3948 nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) + sig.
PP_3949 PP_3949 HTH-type transcriptional repressor NicS - insig.
PP_3950 PP_3950 Methyl-accepting chemotaxis transducer - sig.
PP_3951 PP_3951 3-oxoadipate CoA-transferase subunit A + strong
PP_3952 PP_3952 3-oxoadipate CoA-transferase subunit A + strong
PP_3953 PP_3953 potassium transporter + insig.

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