Gene info for PP_3621 in Pseudomonas putida KT2440

Updated annotation (from data): vanillin dehydrogenase, iorA-like component
Rationale: Specifically important in carbon source Vanillin. This gene cluster is probably the major vanillin dehydrogenase in P. putida. This system is expected to use a molybdopterin cofactor, which explains why molybdate uptake is required for growth on vanillin (PMID:24136472).
Original annotation: isoquinoline 1-oxidoreductase subunit alpha
Type 1: Protein-coding gene
Located on scaffold AE015451, + strand, nucleotides 4,116,856 to 4,117,311
See nucleotide sequence around PP_3621 or for all of scaffold AE015451

Other databases: NCBI, uniprot: Q88GU6

Nearby Genes

500 ntPP_3616 and PP_3617 are separated by 2 nucleotidesPP_3617 and PP_3618 are separated by 149 nucleotidesPP_3618 and PP_3619 are separated by 245 nucleotidesPP_3619 and PP_3620 are separated by 145 nucleotidesPP_3620 and PP_3621 are separated by 270 nucleotidesPP_3621 and PP_3622 overlap by 1 nucleotidesPP_3622 and PP_3623 are separated by 18 nucleotidesPP_3623 and PP_3624 are separated by 69 nucleotidesPP_3624 and PP_3625 are separated by 207 nucleotidesPP_3625 and PP_3626 are separated by 50 nucleotides PP_3616: PP_3616 - conserved membrane protein of unknown function, at 4,108,179 to 4,111,169 _3616 PP_3617: PP_3617 - conserved membrane protein of unknown function, at 4,111,172 to 4,112,068 _3617 PP_3618: PP_3618 - conserved protein of unknown function, at 4,112,218 to 4,113,111 _3618 PP_3619: PP_3619 - conserved protein of unknown function, at 4,113,357 to 4,114,253 _3619 PP_3620: PP_3620 - cofactor of beta-methylthiolation of ribosomal protein S12, at 4,114,399 to 4,116,585 _3620 PP_3621: PP_3621 - vanillin dehydrogenase, iorA-like component (from data), at 4,116,856 to 4,117,311 _3621 PP_3622: PP_3622 - vanillin dehydrogenase, iorB-like component (from data), at 4,117,311 to 4,119,566 _3622 PP_3623: PP_3623 - vanillin dehydrogenase, cytochrome c component (from data), at 4,119,585 to 4,120,928 _3623 PP_3624: PP_3624 - conserved exported protein of unknown function, at 4,120,998 to 4,121,786 _3624 PP_3625: PP_3625 - Transporter, LysE family, at 4,121,994 to 4,122,635 _3625 PP_3626: PP_3626 - conserved protein of unknown function, at 4,122,686 to 4,122,886 _3626
Locus Name Description Strand Phenotype
PP_3616 PP_3616 conserved membrane protein of unknown function + insig.
PP_3617 PP_3617 conserved membrane protein of unknown function + insig.
PP_3618 PP_3618 conserved protein of unknown function + insig.
PP_3619 PP_3619 conserved protein of unknown function + insig.
PP_3620 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 - insig.
PP_3621 PP_3621 vanillin dehydrogenase, iorA-like component (from data) + strong
PP_3622 PP_3622 vanillin dehydrogenase, iorB-like component (from data) + strong
PP_3623 PP_3623 vanillin dehydrogenase, cytochrome c component (from data) + strong
PP_3624 PP_3624 conserved exported protein of unknown function - insig.
PP_3625 PP_3625 Transporter, LysE family - sig.
PP_3626 PP_3626 conserved protein of unknown function - no data

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