Gene info for PP_2909 in Pseudomonas putida KT2440

Updated annotation (from data): glutarate hydroxylase
Rationale: Specifically important in carbon source 2-Piperidinone; carbon source 5-Aminovaleric acid. This is part of the pathway from L-lysine and 5-aminovalerate to succinate. For detailed rationale and biochemical evidence, see https://doi.org/10.1101/450254
Original annotation: carbon starvation induced protein
Type 1: Protein-coding gene
Located on scaffold AE015451, + strand, nucleotides 3,307,794 to 3,308,771
See nucleotide sequence around PP_2909 or for all of scaffold AE015451

Other databases: NCBI, uniprot: Q88IU0

Nearby Genes

Locus	Name	Description	Strand	Phenotype
PP_2904	PP_2904	Glutamine--tRNA ligase	+	no data
PP_2905	PP_2905	Cysteine--tRNA ligase	+	no data
PP_2906	PP_2906	Sensor histidine kinase	-	strong
PP_2907	PP_2907	DNA-binding response regulator	-	sig.
PP_2908	PP_2908	DNA-binding transcriptional repressor	-	strong
PP_2909	PP_2909	glutarate hydroxylase (from data)	+	strong
PP_2910	PP_2910	L-2-hydroxyglutarate oxidase	+	strong
PP_2911	PP_2911	gamma-aminobutyrate permease	+	sig.
PP_2912	PP_2912	conserved protein of unknown function	+	insig.
PP_2913	PP_2913	5-aminolevulinate dehydratase	+	no data
PP_2914	PP_2914	osmosensory proline/betaine/H+ permease	+	insig.

Or browse nearby genes