Gene info for PP_1171 in Pseudomonas putida KT2440

Updated annotation (from data): Uronate dehydrogenase (EC 1.1.1.203)
Rationale: Specifically important for utilizing D-Glucuronic Acid. Automated validation from mutant phenotype: the predicted function (1.1.1.203) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: uronate dehydrogenase
Type 1: Protein-coding gene
Located on scaffold AE015451, - strand, nucleotides 1,346,086 to 1,346,892
See nucleotide sequence around PP_1171 or for all of scaffold AE015451

Other databases: NCBI, uniprot: Q88NN6

Nearby Genes

500 ntPP_1166 and PP_1167 are separated by 54 nucleotidesPP_1167 and PP_1168 are separated by 0 nucleotidesPP_1168 and PP_1169 are separated by 9 nucleotidesPP_1169 and PP_1170 are separated by 64 nucleotidesPP_1170 and PP_1171 are separated by 22 nucleotidesPP_1171 and PP_1173 are separated by 403 nucleotidesPP_1173 and PP_1174 are separated by 753 nucleotidesPP_1174 and PP_1176 are separated by 976 nucleotidesPP_1176 and PP_1177 are separated by 0 nucleotidesPP_1177 and PP_1178 are separated by 441 nucleotides PP_1166: PP_1166 - putative permease of the drug/metabolite transporter (DMT) superfamily, at 1,341,293 to 1,342,216 _1166 PP_1167: PP_1167 - D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data), at 1,342,271 to 1,343,551 _1167 PP_1168: PP_1168 - D-glucuronate / D-galacturonate TRAP transporter, small permease component (from data), at 1,343,552 to 1,344,136 _1168 PP_1169: PP_1169 - D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data), at 1,344,146 to 1,345,117 _1169 PP_1170: PP_1170 - D-glucaro-1,5-lactonase UxuL (from data), at 1,345,182 to 1,346,063 _1170 PP_1171: PP_1171 - Uronate dehydrogenase (EC 1.1.1.203) (from data), at 1,346,086 to 1,346,892 _1171 PP_1173: PP_1173 - porin-like protein, at 1,347,296 to 1,348,534 _1173 PP_1174: PP_1174 - conserved protein of unknown function, at 1,349,288 to 1,349,422 _1174 PP_1176: PP_1176 - conserved protein of unknown function, at 1,350,399 to 1,350,533 _1176 PP_1177: PP_1177 - Ribonucleoside-diphosphate reductase subunit beta, at 1,350,534 to 1,351,784 _1177 PP_1178: PP_1178 - conserved protein of unknown function, at 1,352,226 to 1,352,357 _1178
Locus Name Description Strand Phenotype
PP_1166 PP_1166 putative permease of the drug/metabolite transporter (DMT) superfamily - insig.
PP_1167 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) - strong
PP_1168 PP_1168 D-glucuronate / D-galacturonate TRAP transporter, small permease component (from data) - strong
PP_1169 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) - strong
PP_1170 PP_1170 D-glucaro-1,5-lactonase UxuL (from data) - strong
PP_1171 PP_1171 Uronate dehydrogenase (EC 1.1.1.203) (from data) - strong
PP_1173 PP_1173 porin-like protein - insig.
PP_1174 PP_1174 conserved protein of unknown function - insig.
PP_1176 PP_1176 conserved protein of unknown function - insig.
PP_1177 PP_1177 Ribonucleoside-diphosphate reductase subunit beta - no data
PP_1178 PP_1178 conserved protein of unknown function - sig.

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