Gene info for PP_0302 in Pseudomonas putida KT2440

Updated annotation (from data): L-carnitine 3-dehydrogenase (EC 1.1.1.108)
Rationale: Specific phenotype: utilization of Carnitine
Original annotation: L-carnitine dehydrogenase
Type 1: Protein-coding gene
Located on scaffold AE015451, - strand, nucleotides 362,517 to 363,482
See nucleotide sequence around PP_0302 or for all of scaffold AE015451

Other databases: NCBI, uniprot: Q88R32

Nearby Genes

500 ntPP_5441 and PP_0298 are separated by 171 nucleotidesPP_0298 and PP_0299 are separated by 119 nucleotidesPP_0299 and PP_0300 are separated by 131 nucleotidesPP_0300 and PP_0301 are separated by 99 nucleotidesPP_0301 and PP_0302 are separated by 10 nucleotidesPP_0302 and PP_0303 are separated by 166 nucleotidesPP_0303 and PP_0304 are separated by 123 nucleotidesPP_0304 and PP_0305 are separated by 132 nucleotidesPP_0305 and PP_5442 are separated by 3 nucleotidesPP_5442 and PP_0306 are separated by 73 nucleotides PP_5441: PP_5441 - protein of unknown function, at 358,162 to 358,362 _5441 PP_0298: PP_0298 - AraC-family transcriptional regulator, at 358,534 to 359,640 _0298 PP_0299: PP_0299 - conserved protein of unknown function, at 359,760 to 360,218 _0299 PP_0300: PP_0300 - putative metallopeptidase, at 360,350 to 361,936 _0300 PP_0301: PP_0301 - betainyl-CoA thiolase, at 362,036 to 362,506 _0301 PP_0302: PP_0302 - L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data), at 362,517 to 363,482 _0302 PP_0303: PP_0303 - dehydrocarnitine cleavage enzyme, at 363,649 to 364,533 _0303 PP_0304: PP_0304 - Carnitine uptake ABC transporter, periplasmic component, at 364,657 to 365,601 _0304 PP_0305: PP_0305 - HTH-type transcriptional regulator CdhR, at 365,734 to 366,693 _0305 PP_5442: PP_5442 - protein of unknown function, at 366,697 to 367,314 _5442 PP_0306: PP_0306 - conserved protein of unknown function, at 367,388 to 368,116 _0306
Locus Name Description Strand Phenotype
PP_5441 PP_5441 protein of unknown function + sig.
PP_0298 PP_0298 AraC-family transcriptional regulator + strong
PP_0299 PP_0299 conserved protein of unknown function - insig.
PP_0300 PP_0300 putative metallopeptidase + insig.
PP_0301 PP_0301 betainyl-CoA thiolase - strong
PP_0302 PP_0302 L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) - strong
PP_0303 PP_0303 dehydrocarnitine cleavage enzyme - strong
PP_0304 PP_0304 Carnitine uptake ABC transporter, periplasmic component - strong
PP_0305 PP_0305 HTH-type transcriptional regulator CdhR + strong
PP_5442 PP_5442 protein of unknown function - insig.
PP_0306 PP_0306 conserved protein of unknown function - sig.

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