Gene info for PFR28_01840 in Pseudomonas sp. RS175

Annotation: putative D-xylose utilization operon transcriptional repressor
Type 1: Protein-coding gene
Located on scaffold Pseudomonas_frederiksbergensis_TBS28, + strand, nucleotides 2,064,550 to 2,065,263
See nucleotide sequence around PFR28_01840 or for all of scaffold Pseudomonas_frederiksbergensis_TBS28

Other databases: NCBI

Nearby Genes

500 ntPFR28_01835 and PFR28_01836 are separated by 52 nucleotidesPFR28_01836 and PFR28_01837 are separated by 213 nucleotidesPFR28_01837 and PFR28_01838 are separated by 86 nucleotidesPFR28_01838 and PFR28_01839 are separated by 140 nucleotidesPFR28_01839 and PFR28_01840 are separated by 182 nucleotidesPFR28_01840 and PFR28_01841 are separated by 127 nucleotidesPFR28_01841 and PFR28_01842 overlap by 4 nucleotidesPFR28_01842 and PFR28_01843 are separated by 222 nucleotidesPFR28_01843 and PFR28_01844 are separated by 79 nucleotidesPFR28_01844 and PFR28_01845 are separated by 54 nucleotides PFR28_01835: PFR28_01835 - Porin-like protein NicP, at 2,057,934 to 2,059,241 _01835 PFR28_01836: PFR28_01836 - Transcriptional regulator SlyA, at 2,059,294 to 2,059,782 _01836 PFR28_01837: PFR28_01837 - Hydroxycinnamoyl-CoA hydratase-lyase, at 2,059,996 to 2,060,826 _01837 PFR28_01838: PFR28_01838 - Vanillin dehydrogenase, at 2,060,913 to 2,062,361 _01838 PFR28_01839: PFR28_01839 - Long-chain-fatty-acid--CoA ligase FadD15, at 2,062,502 to 2,064,367 _01839 PFR28_01840: PFR28_01840 - putative D-xylose utilization operon transcriptional repressor, at 2,064,550 to 2,065,263 _01840 PFR28_01841: PFR28_01841 - Oxidoreductase NdmD, at 2,065,391 to 2,066,341 _01841 PFR28_01842: PFR28_01842 - Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1, at 2,066,338 to 2,067,423 _01842 PFR28_01843: PFR28_01843 - hypothetical protein, at 2,067,646 to 2,068,071 _01843 PFR28_01844: PFR28_01844 - HTH-type transcriptional activator RhaS, at 2,068,151 to 2,068,987 _01844 PFR28_01845: PFR28_01845 - Cysteine/O-acetylserine efflux protein, at 2,069,042 to 2,069,644 _01845
Locus Name Description Strand Phenotype
PFR28_01835 PFR28_01835 Porin-like protein NicP + strong
PFR28_01836 PFR28_01836 Transcriptional regulator SlyA - strong
PFR28_01837 PFR28_01837 Hydroxycinnamoyl-CoA hydratase-lyase + strong
PFR28_01838 PFR28_01838 Vanillin dehydrogenase + strong
PFR28_01839 PFR28_01839 Long-chain-fatty-acid--CoA ligase FadD15 + strong
PFR28_01840 PFR28_01840 putative D-xylose utilization operon transcriptional repressor + insig.
PFR28_01841 PFR28_01841 Oxidoreductase NdmD - strong
PFR28_01842 PFR28_01842 Toluene-4-sulfonate monooxygenase system iron-sulfur subunit TsaM1 - strong
PFR28_01843 PFR28_01843 hypothetical protein + sig.
PFR28_01844 PFR28_01844 HTH-type transcriptional activator RhaS + strong
PFR28_01845 PFR28_01845 Cysteine/O-acetylserine efflux protein + strong

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