Gene info for PFR28_00216 in Pseudomonas sp. RS175

Annotation: N-acetylmuramoyl-L-alanine amidase AmiD
Type 1: Protein-coding gene
Located on scaffold Pseudomonas_frederiksbergensis_TBS28, - strand, nucleotides 239,018 to 239,785
See nucleotide sequence around PFR28_00216 or for all of scaffold Pseudomonas_frederiksbergensis_TBS28

Other databases: NCBI

Nearby Genes

500 ntPFR28_00211 and PFR28_00212 are separated by 155 nucleotidesPFR28_00212 and PFR28_00213 are separated by 153 nucleotidesPFR28_00213 and PFR28_00214 overlap by 1 nucleotidesPFR28_00214 and PFR28_00215 are separated by 179 nucleotidesPFR28_00215 and PFR28_00216 are separated by 41 nucleotidesPFR28_00216 and PFR28_00217 are separated by 888 nucleotidesPFR28_00217 and PFR28_00218 are separated by 22 nucleotidesPFR28_00218 and PFR28_00219 are separated by 139 nucleotidesPFR28_00219 and PFR28_00220 are separated by 188 nucleotidesPFR28_00220 and PFR28_00221 are separated by 115 nucleotides PFR28_00211: PFR28_00211 - Blue-light photoreceptor, at 234,960 to 235,436 _00211 PFR28_00212: PFR28_00212 - hypothetical protein, at 235,592 to 236,047 _00212 PFR28_00213: PFR28_00213 - L-fuculose phosphate aldolase, at 236,201 to 236,983 _00213 PFR28_00214: PFR28_00214 - Cis-3-alkyl-4-alkyloxetan-2-one decarboxylase, at 236,983 to 237,885 _00214 PFR28_00215: PFR28_00215 - Putative short-chain type dehydrogenase/reductase, at 238,065 to 238,976 _00215 PFR28_00216: PFR28_00216 - N-acetylmuramoyl-L-alanine amidase AmiD, at 239,018 to 239,785 _00216 PFR28_00217: PFR28_00217 - hypothetical protein, at 240,674 to 242,467 _00217 PFR28_00218: PFR28_00218 - hypothetical protein, at 242,490 to 243,857 _00218 PFR28_00219: PFR28_00219 - HTH-type transcriptional regulator MalT, at 243,997 to 246,549 _00219 PFR28_00220: PFR28_00220 - Pectin degradation repressor protein KdgR, at 246,738 to 247,523 _00220 PFR28_00221: PFR28_00221 - Homogentisate 1,2-dioxygenase, at 247,639 to 248,943 _00221
Locus Name Description Strand Phenotype
PFR28_00211 PFR28_00211 Blue-light photoreceptor - insig.
PFR28_00212 PFR28_00212 hypothetical protein + strong
PFR28_00213 PFR28_00213 L-fuculose phosphate aldolase + insig.
PFR28_00214 PFR28_00214 Cis-3-alkyl-4-alkyloxetan-2-one decarboxylase + insig.
PFR28_00215 PFR28_00215 Putative short-chain type dehydrogenase/reductase + insig.
PFR28_00216 PFR28_00216 N-acetylmuramoyl-L-alanine amidase AmiD - insig.
PFR28_00217 PFR28_00217 hypothetical protein + insig.
PFR28_00218 PFR28_00218 hypothetical protein + insig.
PFR28_00219 PFR28_00219 HTH-type transcriptional regulator MalT + insig.
PFR28_00220 PFR28_00220 Pectin degradation repressor protein KdgR - sig.
PFR28_00221 PFR28_00221 Homogentisate 1,2-dioxygenase + strong

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