Gene info for PFR28_00048 in Pseudomonas sp. RS175

Annotation: putative D,D-dipeptide transport ATP-binding protein DdpF
Type 1: Protein-coding gene
Located on scaffold Pseudomonas_frederiksbergensis_TBS28, - strand, nucleotides 58,130 to 59,119
See nucleotide sequence around PFR28_00048 or for all of scaffold Pseudomonas_frederiksbergensis_TBS28

Other databases: NCBI

Nearby Genes

500 ntPFR28_00043 and PFR28_00044 are separated by 46 nucleotidesPFR28_00044 and PFR28_00045 overlap by 4 nucleotidesPFR28_00045 and PFR28_00046 are separated by 118 nucleotidesPFR28_00046 and PFR28_00047 overlap by 4 nucleotidesPFR28_00047 and PFR28_00048 overlap by 4 nucleotidesPFR28_00048 and PFR28_00049 overlap by 4 nucleotidesPFR28_00049 and PFR28_00050 are separated by 16 nucleotidesPFR28_00050 and PFR28_00051 are separated by 9 nucleotidesPFR28_00051 and PFR28_00052 are separated by 103 nucleotidesPFR28_00052 and PFR28_00053 are separated by 186 nucleotides PFR28_00043: PFR28_00043 - hypothetical protein, at 51,819 to 52,277 _00043 PFR28_00044: PFR28_00044 - hypothetical protein, at 52,324 to 52,746 _00044 PFR28_00045: PFR28_00045 - Pyruvate dehydrogenase E1 component, at 52,743 to 55,439 _00045 PFR28_00046: PFR28_00046 - Carboxypeptidase G2, at 55,558 to 56,712 _00046 PFR28_00047: PFR28_00047 - Succinyl-diaminopimelate desuccinylase, at 56,709 to 58,133 _00047 PFR28_00048: PFR28_00048 - putative D,D-dipeptide transport ATP-binding protein DdpF, at 58,130 to 59,119 _00048 PFR28_00049: PFR28_00049 - Oligopeptide transport ATP-binding protein OppD, at 59,116 to 60,132 _00049 PFR28_00050: PFR28_00050 - Dipeptide transport system permease protein DppC, at 60,149 to 61,051 _00050 PFR28_00051: PFR28_00051 - Glutathione transport system permease protein GsiC, at 61,061 to 61,978 _00051 PFR28_00052: PFR28_00052 - Heme-binding protein A, at 62,082 to 63,602 _00052 PFR28_00053: PFR28_00053 - HTH-type transcriptional regulator GltC, at 63,789 to 64,706 _00053
Locus Name Description Strand Phenotype
PFR28_00043 PFR28_00043 hypothetical protein + insig.
PFR28_00044 PFR28_00044 hypothetical protein + sig.
PFR28_00045 PFR28_00045 Pyruvate dehydrogenase E1 component + insig.
PFR28_00046 PFR28_00046 Carboxypeptidase G2 - insig.
PFR28_00047 PFR28_00047 Succinyl-diaminopimelate desuccinylase - insig.
PFR28_00048 PFR28_00048 putative D,D-dipeptide transport ATP-binding protein DdpF - insig.
PFR28_00049 PFR28_00049 Oligopeptide transport ATP-binding protein OppD - sig.
PFR28_00050 PFR28_00050 Dipeptide transport system permease protein DppC - insig.
PFR28_00051 PFR28_00051 Glutathione transport system permease protein GsiC - insig.
PFR28_00052 PFR28_00052 Heme-binding protein A - insig.
PFR28_00053 PFR28_00053 HTH-type transcriptional regulator GltC + insig.

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