Gene info for OKGIIK_13865 in Rhodanobacter sp. FW510-T8

Name: rpoD
Annotation: RNA polymerase sigma factor RpoD
Type 1: Protein-coding gene
Located on scaffold contig_1_polypolish, + strand, nucleotides 3,012,562 to 3,014,439
See nucleotide sequence around OKGIIK_13865 or for all of scaffold contig_1_polypolish

Other databases: NCBI

Nearby Genes

500 nttagB and arnT are separated by 79 nucleotidesarnT and OKGIIK_13850 overlap by 4 nucleotidesOKGIIK_13850 and OKGIIK_13855 are separated by 247 nucleotidesOKGIIK_13855 and dtd are separated by 49 nucleotidesdtd and rpoD are separated by 167 nucleotidesrpoD and OKGIIK_13870 are separated by 72 nucleotidesOKGIIK_13870 and Ile2_trna are separated by 123 nucleotidesIle2_trna and OKGIIK_13880 are separated by 555 nucleotidesOKGIIK_13880 and eAL are separated by 18 nucleotideseAL and OKGIIK_13890 are separated by 18 nucleotides OKGIIK_13840: tagB - CDP-glycerol glycerophosphotransferase, at 3,007,569 to 3,008,600 tagB OKGIIK_13845: arnT - glycosyl transferase, at 3,008,680 to 3,010,410 arnT OKGIIK_13850: OKGIIK_13850 - BTAD domain-containing protein, at 3,010,407 to 3,010,733 _13850 OKGIIK_13855: OKGIIK_13855 - Lipid A biosynthesis acyltransferase, at 3,010,981 to 3,011,904 _13855 OKGIIK_13860: dtd - D-aminoacyl-tRNA deacylase, at 3,011,954 to 3,012,394 dtd OKGIIK_13865: rpoD - RNA polymerase sigma factor RpoD, at 3,012,562 to 3,014,439 rpoD OKGIIK_13870: OKGIIK_13870 - Ketosteroid isomerase-related protein, at 3,014,512 to 3,014,883 _13870 OKGIIK_13875: Ile2_trna - tRNA-Ile2, at 3,015,007 to 3,015,082 _trna OKGIIK_13880: OKGIIK_13880 - Chemotaxis protein, at 3,015,638 to 3,017,275 _13880 OKGIIK_13885: eAL - phosphodiesterase, at 3,017,294 to 3,019,099 eAL OKGIIK_13890: OKGIIK_13890 - CHAD domain-containing protein, at 3,019,118 to 3,019,972 _13890
Locus Name Description Strand Phenotype
OKGIIK_13840 tagB CDP-glycerol glycerophosphotransferase + strong
OKGIIK_13845 arnT glycosyl transferase + no data
OKGIIK_13850 OKGIIK_13850 BTAD domain-containing protein + insig.
OKGIIK_13855 OKGIIK_13855 Lipid A biosynthesis acyltransferase - no data
OKGIIK_13860 dtd D-aminoacyl-tRNA deacylase + insig.
OKGIIK_13865 rpoD RNA polymerase sigma factor RpoD + no data
OKGIIK_13870 OKGIIK_13870 Ketosteroid isomerase-related protein - insig.
OKGIIK_13875 Ile2_trna tRNA-Ile2 + no data
OKGIIK_13880 OKGIIK_13880 Chemotaxis protein + insig.
OKGIIK_13885 eAL phosphodiesterase + insig.
OKGIIK_13890 OKGIIK_13890 CHAD domain-containing protein - no data

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