Gene info for OKGIIK_13775 in Rhodanobacter sp. FW510-T8

Name: xkdP
Annotation: peptidoglycan-binding protein
Type 1: Protein-coding gene
Located on scaffold contig_1_polypolish, - strand, nucleotides 2,994,124 to 2,995,245
See nucleotide sequence around OKGIIK_13775 or for all of scaffold contig_1_polypolish

Other databases: NCBI

Nearby Genes

500 ntpurD and OKGIIK_13755 are separated by 89 nucleotidesOKGIIK_13755 and OKGIIK_13760 are separated by 135 nucleotidesOKGIIK_13760 and topA are separated by 0 nucleotidestopA and dprA are separated by 105 nucleotidesdprA and xkdP are separated by 92 nucleotidesxkdP and OKGIIK_13780 are separated by 128 nucleotidesOKGIIK_13780 and fmt overlap by 4 nucleotidesfmt and rsmB overlap by 4 nucleotidesrsmB and arnT are separated by 107 nucleotidesarnT and OKGIIK_13800 are separated by 265 nucleotides OKGIIK_13750: purD - phosphoribosylamine--glycine ligase, at 2,986,821 to 2,988,104 purD OKGIIK_13755: OKGIIK_13755 - AMP-ligase, at 2,988,194 to 2,989,567 _13755 OKGIIK_13760: OKGIIK_13760 - Threonylcarbamoyl-AMP synthase, at 2,989,703 to 2,990,275 _13760 OKGIIK_13765: topA - DNA topoisomerase I, at 2,990,276 to 2,992,759 topA OKGIIK_13770: dprA - DNA-processing protein DprA, at 2,992,865 to 2,994,031 dprA OKGIIK_13775: xkdP - peptidoglycan-binding protein, at 2,994,124 to 2,995,245 xkdP OKGIIK_13780: OKGIIK_13780 - Peptide deformylase 2, at 2,995,374 to 2,995,943 _13780 OKGIIK_13785: fmt - methionyl-tRNA formyltransferase, at 2,995,940 to 2,996,881 fmt OKGIIK_13790: rsmB - 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB, at 2,996,878 to 2,998,179 rsmB OKGIIK_13795: arnT - PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA, at 2,998,287 to 3,000,008 arnT OKGIIK_13800: OKGIIK_13800 - O-antigen ligase domain-containing protein, at 3,000,274 to 3,001,425 _13800
Locus Name Description Strand Phenotype
OKGIIK_13750 purD phosphoribosylamine--glycine ligase - cofit
OKGIIK_13755 OKGIIK_13755 AMP-ligase - cofit
OKGIIK_13760 OKGIIK_13760 Threonylcarbamoyl-AMP synthase - no data
OKGIIK_13765 topA DNA topoisomerase I - no data
OKGIIK_13770 dprA DNA-processing protein DprA - insig.
OKGIIK_13775 xkdP peptidoglycan-binding protein - insig.
OKGIIK_13780 OKGIIK_13780 Peptide deformylase 2 + no data
OKGIIK_13785 fmt methionyl-tRNA formyltransferase + no data
OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB + insig.
OKGIIK_13795 arnT PMT family glycosyltransferase ArnT/Agl22, involved in glycosylation of proteins and lipid IVA + insig.
OKGIIK_13800 OKGIIK_13800 O-antigen ligase domain-containing protein + cofit

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