Gene info for OKGIIK_01180 in Rhodanobacter sp. FW510-T8

Name: metC
Annotation: cystathionine beta-lyase
Type 1: Protein-coding gene
Located on scaffold contig_1_polypolish, + strand, nucleotides 254,110 to 255,279
See nucleotide sequence around OKGIIK_01180 or for all of scaffold contig_1_polypolish

Other databases: NCBI

Nearby Genes

500 ntcpsB and rfbD are separated by 16 nucleotidesrfbD and rfbC are separated by 143 nucleotidesrfbC and rfbA overlap by 4 nucleotidesrfbA and rfbB overlap by 4 nucleotidesrfbB and metC are separated by 273 nucleotidesmetC and OKGIIK_01185 are separated by 49 nucleotidesOKGIIK_01185 and OKGIIK_01190 are separated by 13 nucleotidesOKGIIK_01190 and OKGIIK_01195 are separated by 284 nucleotidesOKGIIK_01195 and OKGIIK_01200 overlap by 4 nucleotidesOKGIIK_01200 and OKGIIK_01205 overlap by 35 nucleotides OKGIIK_01155: cpsB - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 248,823 to 250,235 cpsB OKGIIK_01160: rfbD - dTDP-4-dehydrorhamnose reductase, at 250,252 to 251,187 rfbD OKGIIK_01165: rfbC - dTDP-4-dehydrorhamnose 3,5-epimerase, at 251,331 to 251,888 rfbC OKGIIK_01170: rfbA - glucose-1-phosphate thymidylyltransferase RfbA, at 251,885 to 252,769 rfbA OKGIIK_01175: rfbB - dTDP-glucose 4,6-dehydratase, at 252,766 to 253,836 rfbB OKGIIK_01180: metC - cystathionine beta-lyase, at 254,110 to 255,279 metC OKGIIK_01185: OKGIIK_01185 - Glycosyl transferase, at 255,329 to 256,732 _01185 OKGIIK_01190: OKGIIK_01190 - Transport permease protein, at 256,746 to 257,540 _01190 OKGIIK_01195: OKGIIK_01195 - ABC transporter, ATP-binding protein, at 257,825 to 258,763 _01195 OKGIIK_01200: OKGIIK_01200 - FkbM family methyltransferase, at 258,760 to 260,784 _01200 OKGIIK_01205: OKGIIK_01205 - Glycosyl transferases group 1, at 260,750 to 264,250 _01205
Locus Name Description Strand Phenotype
OKGIIK_01155 cpsB mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase - strong
OKGIIK_01160 rfbD dTDP-4-dehydrorhamnose reductase - cofit
OKGIIK_01165 rfbC dTDP-4-dehydrorhamnose 3,5-epimerase - strong
OKGIIK_01170 rfbA glucose-1-phosphate thymidylyltransferase RfbA - strong
OKGIIK_01175 rfbB dTDP-glucose 4,6-dehydratase - strong
OKGIIK_01180 metC cystathionine beta-lyase + cofit
OKGIIK_01185 OKGIIK_01185 Glycosyl transferase + cofit
OKGIIK_01190 OKGIIK_01190 Transport permease protein + cofit
OKGIIK_01195 OKGIIK_01195 ABC transporter, ATP-binding protein + cofit
OKGIIK_01200 OKGIIK_01200 FkbM family methyltransferase + strong
OKGIIK_01205 OKGIIK_01205 Glycosyl transferases group 1 + cofit

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