Gene info for OKFHMN_26545 in Escherichia coli ECRC100

Name: pdeD
Annotation: putative cyclic di-GMP phosphodiesterase PdeD
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 5,108,565 to 5,110,163
See nucleotide sequence around OKFHMN_26545 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntmanZ and manY are separated by 12 nucleotidesmanY and manX are separated by 62 nucleotidesmanX and yoaL are separated by 265 nucleotidesyoaL and yoaE overlap by 13 nucleotidesyoaE and pdeD are separated by 3 nucleotidespdeD and sdaA are separated by 130 nucleotidessdaA and nudL are separated by 183 nucleotidesnudL and pabB are separated by 3 nucleotidespabB and yoaH are separated by 73 nucleotidesyoaH and yoaC are separated by 119 nucleotides OKFHMN_26520: manZ - PTS mannose transporter subunit IID, at 5,103,844 to 5,104,695 manZ OKFHMN_26525: manY - PTS mannose transporter subunit IIC, at 5,104,708 to 5,105,508 manY OKFHMN_26530: manX - PTS mannose transporter subunit IIAB, at 5,105,571 to 5,106,542 manX OKFHMN_26535: yoaL - Protein YoaL, at 5,106,808 to 5,107,017 yoaL OKFHMN_26540: yoaE - CNNM family cation transport protein YoaE, at 5,107,005 to 5,108,561 yoaE OKFHMN_26545: pdeD - putative cyclic di-GMP phosphodiesterase PdeD, at 5,108,565 to 5,110,163 pdeD OKFHMN_26550: sdaA - L-serine ammonia-lyase, at 5,110,294 to 5,111,658 sdaA OKFHMN_26555: nudL - CoA pyrophosphatase, at 5,111,842 to 5,112,420 nudL OKFHMN_26560: pabB - aminodeoxychorismate synthase component 1, at 5,112,424 to 5,113,785 pabB OKFHMN_26565: yoaH - YoaH family protein, at 5,113,859 to 5,114,038 yoaH OKFHMN_26570: yoaC - Uncharacterized protein YoaC, at 5,114,158 to 5,114,457 yoaC
Locus Name Description Strand Phenotype
OKFHMN_26520 manZ PTS mannose transporter subunit IID - insig.
OKFHMN_26525 manY PTS mannose transporter subunit IIC - cofit
OKFHMN_26530 manX PTS mannose transporter subunit IIAB - cofit
OKFHMN_26535 yoaL Protein YoaL + no data
OKFHMN_26540 yoaE CNNM family cation transport protein YoaE + cofit
OKFHMN_26545 pdeD putative cyclic di-GMP phosphodiesterase PdeD - cofit
OKFHMN_26550 sdaA L-serine ammonia-lyase - cofit
OKFHMN_26555 nudL CoA pyrophosphatase - insig.
OKFHMN_26560 pabB aminodeoxychorismate synthase component 1 - cofit
OKFHMN_26565 yoaH YoaH family protein + no data
OKFHMN_26570 yoaC Uncharacterized protein YoaC - no data

Or browse nearby genes

Or see the comparative fitness browser