Gene info for OKFHMN_20495 in Escherichia coli ECRC100

Name: rpoS
Annotation: RNA polymerase sigma factor RpoS
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 3,988,367 to 3,989,308
See nucleotide sequence around OKFHMN_20495 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntispF and truD overlap by 4 nucleotidestruD and surE overlap by 20 nucleotidessurE and pcm overlap by 7 nucleotidespcm and nlpD are separated by 139 nucleotidesnlpD and rpoS are separated by 114 nucleotidesrpoS and hosA are separated by 119 nucleotideshosA and ecdB are separated by 146 nucleotidesecdB and edcC overlap by 1 nucleotidesedcC and ecdD are separated by 10 nucleotidesecdD and pphB are separated by 40 nucleotides OKFHMN_20470: ispF - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,984,086 to 3,984,565 ispF OKFHMN_20475: truD - tRNA pseudouridine(13) synthase TruD, at 3,984,562 to 3,985,611 truD OKFHMN_20480: surE - 5'/3'-nucleotidase SurE, at 3,985,592 to 3,986,353 surE OKFHMN_20485: pcm - protein-L-isoaspartate O-methyltransferase, at 3,986,347 to 3,986,973 pcm OKFHMN_20490: nlpD - murein hydrolase activator NlpD, at 3,987,113 to 3,988,252 nlpD OKFHMN_20495: rpoS - RNA polymerase sigma factor RpoS, at 3,988,367 to 3,989,308 rpoS OKFHMN_20500: hosA - Transcriptional regulator HosA, at 3,989,428 to 3,989,835 hosA OKFHMN_20505: ecdB - putative UbiX-like flavin prenyltransferase, at 3,989,982 to 3,990,575 ecdB OKFHMN_20510: edcC - Phenolic acid decarboxylase, at 3,990,575 to 3,992,002 edcC OKFHMN_20515: ecdD - Protein EcdD, at 3,992,013 to 3,992,249 ecdD OKFHMN_20520: pphB - protein-serine/threonine phosphatase, at 3,992,290 to 3,992,946 pphB
Locus Name Description Strand Phenotype
OKFHMN_20470 ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + no data
OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD + insig.
OKFHMN_20480 surE 5'/3'-nucleotidase SurE + cofit
OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase + cofit
OKFHMN_20490 nlpD murein hydrolase activator NlpD + insig.
OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS + cofit
OKFHMN_20500 hosA Transcriptional regulator HosA - insig.
OKFHMN_20505 ecdB putative UbiX-like flavin prenyltransferase + insig.
OKFHMN_20510 edcC Phenolic acid decarboxylase + insig.
OKFHMN_20515 ecdD Protein EcdD + insig.
OKFHMN_20520 pphB protein-serine/threonine phosphatase - insig.

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