Gene info for OKFHMN_20125 in Escherichia coli ECRC101

Name: ygdD
Annotation: UPF0382 inner membrane protein YgdD
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 3,912,359 to 3,912,754
See nucleotide sequence around OKFHMN_20125 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 nttcdA and csdE are separated by 50 nucleotidescsdE and csdA overlap by 1 nucleotidescsdA and ygdI are separated by 191 nucleotidesygdI and gcvA are separated by 350 nucleotidesgcvA and ygdD are separated by 18 nucleotidesygdD and rlmM overlap by 8 nucleotidesrlmM and fucR are separated by 43 nucleotidesfucR and fucU are separated by 57 nucleotidesfucU and fucK are separated by 1 nucleotidesfucK and fucI are separated by 108 nucleotides OKFHMN_20095: tcdA - tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA, at 3,908,148 to 3,908,954 tcdA OKFHMN_20100: csdE - cysteine desulfurase sulfur acceptor subunit CsdE, at 3,909,005 to 3,909,448 csdE OKFHMN_20105: csdA - cysteine desulfurase CsdA, at 3,909,448 to 3,910,653 csdA OKFHMN_20110: ygdI - Uncharacterized lipoprotein YgdI, at 3,910,845 to 3,911,072 ygdI OKFHMN_20120: gcvA - glycine cleavage system transcriptional regulator GcvA, at 3,911,423 to 3,912,340 gcvA OKFHMN_20125: ygdD - UPF0382 inner membrane protein YgdD, at 3,912,359 to 3,912,754 ygdD OKFHMN_20130: rlmM - 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM, at 3,912,747 to 3,913,847 rlmM OKFHMN_20135: fucR - L-fucose operon activator, at 3,913,891 to 3,914,622 fucR OKFHMN_20140: fucU - L-fucose mutarotase, at 3,914,680 to 3,915,102 fucU OKFHMN_20145: fucK - L-fuculokinase, at 3,915,104 to 3,916,522 fucK OKFHMN_20150: fucI - L-fucose isomerase, at 3,916,631 to 3,918,406 fucI
Locus Name Description Strand Phenotype
OKFHMN_20095 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA + insig.
OKFHMN_20100 csdE cysteine desulfurase sulfur acceptor subunit CsdE - insig.
OKFHMN_20105 csdA cysteine desulfurase CsdA - insig.
OKFHMN_20110 ygdI Uncharacterized lipoprotein YgdI + insig.
OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA + sig.
OKFHMN_20125 ygdD UPF0382 inner membrane protein YgdD + insig.
OKFHMN_20130 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM + insig.
OKFHMN_20135 fucR L-fucose operon activator - insig.
OKFHMN_20140 fucU L-fucose mutarotase - insig.
OKFHMN_20145 fucK L-fuculokinase - insig.
OKFHMN_20150 fucI L-fucose isomerase - insig.

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