Gene info for OKFHMN_18655 in Escherichia coli ECRC100

Name: rpoD
Annotation: RNA polymerase sigma factor RpoD
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 3,621,976 to 3,623,817
See nucleotide sequence around OKFHMN_18655 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntaer and nfeR are separated by 153 nucleotidesnfeR and nfeF are separated by 287 nucleotidesnfeF and Ile2_trna are separated by 53 nucleotidesIle2_trna and mug are separated by 124 nucleotidesmug and rpoD are separated by 78 nucleotidesrpoD and dnaG are separated by 194 nucleotidesdnaG and rpsU are separated by 110 nucleotidesrpsU and tsaD are separated by 237 nucleotidestsaD and ttdT are separated by 42 nucleotidesttdT and ttdB are separated by 48 nucleotides OKFHMN_18630: aer - aerotaxis sensor receptor Aer, at 3,617,788 to 3,619,308 aer OKFHMN_18635: nfeR - DNA-binding transcriptional regulator NfeR, at 3,619,462 to 3,620,085 nfeR OKFHMN_18640: nfeF - NADPH-dependent ferric chelate reductase, at 3,620,373 to 3,621,137 nfeF OKFHMN_18645: Ile2_trna - tRNA-Ile2(cat), at 3,621,191 to 3,621,266 _trna OKFHMN_18650: mug - G/U mismatch-specific DNA glycosylase, at 3,621,391 to 3,621,897 mug OKFHMN_18655: rpoD - RNA polymerase sigma factor RpoD, at 3,621,976 to 3,623,817 rpoD OKFHMN_18660: dnaG - DNA primase, at 3,624,012 to 3,625,757 dnaG OKFHMN_18665: rpsU - 30S ribosomal protein S21, at 3,625,868 to 3,626,083 rpsU OKFHMN_18670: tsaD - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 3,626,321 to 3,627,334 tsaD OKFHMN_18675: ttdT - L-tartrate/succinate antiporter, at 3,627,377 to 3,628,840 ttdT OKFHMN_18680: ttdB - L(+)-tartrate dehydratase subunit beta, at 3,628,889 to 3,629,494 ttdB
Locus Name Description Strand Phenotype
OKFHMN_18630 aer aerotaxis sensor receptor Aer + insig.
OKFHMN_18635 nfeR DNA-binding transcriptional regulator NfeR - cofit
OKFHMN_18640 nfeF NADPH-dependent ferric chelate reductase + insig.
OKFHMN_18645 Ile2_trna tRNA-Ile2(cat) - no data
OKFHMN_18650 mug G/U mismatch-specific DNA glycosylase + cofit
OKFHMN_18655 rpoD RNA polymerase sigma factor RpoD - no data
OKFHMN_18660 dnaG DNA primase - no data
OKFHMN_18665 rpsU 30S ribosomal protein S21 - no data
OKFHMN_18670 tsaD tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD + no data
OKFHMN_18675 ttdT L-tartrate/succinate antiporter - cofit
OKFHMN_18680 ttdB L(+)-tartrate dehydratase subunit beta - insig.

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