Gene info for OKFHMN_09865 in Escherichia coli ECRC100

Name: tssE
Annotation: type VI secretion system baseplate subunit TssE
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 1,842,036 to 1,842,449
See nucleotide sequence around OKFHMN_09865 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntvgrG,tssI and hcp2,tssD2 are separated by 209 nucleotideshcp2,tssD2 and tssB are separated by 695 nucleotidestssB and OKFHMN_09855 are separated by 34 nucleotidesOKFHMN_09855 and tssC are separated by 50 nucleotidestssC and tssE are separated by 90 nucleotidestssE and tssF are separated by 3 nucleotidestssF and tssG overlap by 37 nucleotidestssG and fha are separated by 24 nucleotidesfha and tssJ overlap by 4 nucleotidestssJ and tssK are separated by 2 nucleotides OKFHMN_09840: vgrG,tssI - type VI secretion system effector VgrG, at 1,836,179 to 1,838,320 vgrG,tssI OKFHMN_09845: hcp2,tssD2 - Type VI secretion system protein, Hcp family, at 1,838,530 to 1,839,048 hcp2,tssD2 OKFHMN_09850: tssB - Type VI secretion system protein TssB, at 1,839,744 to 1,840,244 tssB OKFHMN_09855: OKFHMN_09855 - hypothetical protein, at 1,840,279 to 1,840,503 _09855 OKFHMN_09860: tssC - type VI secretion system contractile sheath large subunit, at 1,840,554 to 1,841,945 tssC OKFHMN_09865: tssE - type VI secretion system baseplate subunit TssE, at 1,842,036 to 1,842,449 tssE OKFHMN_09870: tssF - Type VI secretion system protein TssF, at 1,842,453 to 1,844,303 tssF OKFHMN_09875: tssG - Type VI secretion system protein TssG, at 1,844,267 to 1,845,349 tssG OKFHMN_09880: fha - Type VI secretion system protein Fha, at 1,845,374 to 1,846,654 fha OKFHMN_09885: tssJ - Type VI secretion system protein TssJ, at 1,846,651 to 1,847,175 tssJ OKFHMN_09890: tssK - type VI secretion system baseplate subunit TssK, at 1,847,178 to 1,848,509 tssK
Locus Name Description Strand Phenotype
OKFHMN_09840 vgrG,tssI type VI secretion system effector VgrG - insig.
OKFHMN_09845 hcp2,tssD2 Type VI secretion system protein, Hcp family - cofit
OKFHMN_09850 tssB Type VI secretion system protein TssB + cofit
OKFHMN_09855 OKFHMN_09855 hypothetical protein + cofit
OKFHMN_09860 tssC type VI secretion system contractile sheath large subunit + cofit
OKFHMN_09865 tssE type VI secretion system baseplate subunit TssE + cofit
OKFHMN_09870 tssF Type VI secretion system protein TssF + insig.
OKFHMN_09875 tssG Type VI secretion system protein TssG + cofit
OKFHMN_09880 fha Type VI secretion system protein Fha + cofit
OKFHMN_09885 tssJ Type VI secretion system protein TssJ + insig.
OKFHMN_09890 tssK type VI secretion system baseplate subunit TssK + insig.

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