Gene info for OKFHMN_09845 in Escherichia coli ECRC100

Name: hcp2,tssD2
Annotation: Type VI secretion system protein, Hcp family
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 1,838,530 to 1,839,048
See nucleotide sequence around OKFHMN_09845 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntOKFHMN_09820 and OKFHMN_09825 are separated by 68 nucleotidesOKFHMN_09825 and OKFHMN_09830 are separated by 157 nucleotidesOKFHMN_09830 and rhsA are separated by 958 nucleotidesrhsA and vgrG,tssI are separated by 75 nucleotidesvgrG,tssI and hcp2,tssD2 are separated by 209 nucleotideshcp2,tssD2 and tssB are separated by 695 nucleotidestssB and OKFHMN_09855 are separated by 34 nucleotidesOKFHMN_09855 and tssC are separated by 50 nucleotidestssC and tssE are separated by 90 nucleotidestssE and tssF are separated by 3 nucleotides OKFHMN_09820: OKFHMN_09820 - Sel1 domain protein repeat-containing protein, at 1,828,729 to 1,829,256 _09820 OKFHMN_09825: OKFHMN_09825 - RHS repeat protein, at 1,829,325 to 1,830,857 _09825 OKFHMN_09830: OKFHMN_09830 - Ankyrin repeat containing virulence factor, at 1,831,015 to 1,831,731 _09830 OKFHMN_09835: rhsA - type IV secretion protein Rhs, at 1,832,690 to 1,836,103 rhsA OKFHMN_09840: vgrG,tssI - type VI secretion system effector VgrG, at 1,836,179 to 1,838,320 vgrG,tssI OKFHMN_09845: hcp2,tssD2 - Type VI secretion system protein, Hcp family, at 1,838,530 to 1,839,048 hcp2,tssD2 OKFHMN_09850: tssB - Type VI secretion system protein TssB, at 1,839,744 to 1,840,244 tssB OKFHMN_09855: OKFHMN_09855 - hypothetical protein, at 1,840,279 to 1,840,503 _09855 OKFHMN_09860: tssC - type VI secretion system contractile sheath large subunit, at 1,840,554 to 1,841,945 tssC OKFHMN_09865: tssE - type VI secretion system baseplate subunit TssE, at 1,842,036 to 1,842,449 tssE OKFHMN_09870: tssF - Type VI secretion system protein TssF, at 1,842,453 to 1,844,303 tssF
Locus Name Description Strand Phenotype
OKFHMN_09820 OKFHMN_09820 Sel1 domain protein repeat-containing protein - insig.
OKFHMN_09825 OKFHMN_09825 RHS repeat protein - insig.
OKFHMN_09830 OKFHMN_09830 Ankyrin repeat containing virulence factor - no data
OKFHMN_09835 rhsA type IV secretion protein Rhs - insig.
OKFHMN_09840 vgrG,tssI type VI secretion system effector VgrG - insig.
OKFHMN_09845 hcp2,tssD2 Type VI secretion system protein, Hcp family - insig.
OKFHMN_09850 tssB Type VI secretion system protein TssB + insig.
OKFHMN_09855 OKFHMN_09855 hypothetical protein + cofit
OKFHMN_09860 tssC type VI secretion system contractile sheath large subunit + cofit
OKFHMN_09865 tssE type VI secretion system baseplate subunit TssE + insig.
OKFHMN_09870 tssF Type VI secretion system protein TssF + insig.

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