Gene info for OKFHMN_06080 in Escherichia coli ECRC100

Name: pdeI
Annotation: putative cyclic di-GMP phosphodiesterase PdeI
Type 1: Protein-coding gene
Located on scaffold contig_1, - strand, nucleotides 1,073,613 to 1,075,961
See nucleotide sequence around OKFHMN_06080 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntbssR and rimO are separated by 212 nucleotidesrimO and OKFHMN_06065 are separated by 225 nucleotidesOKFHMN_06065 and yiaG overlap by 11 nucleotidesyiaG and dgcI are separated by 69 nucleotidesdgcI and pdeI are separated by 7 nucleotidespdeI and gsiD are separated by 177 nucleotidesgsiD and gsiC are separated by 2 nucleotidesgsiC and gsiB are separated by 17 nucleotidesgsiB and gsiA are separated by 19 nucleotidesgsiA and iaaA overlap by 14 nucleotides OKFHMN_06055: bssR - biofilm formation regulator BssR, at 1,069,355 to 1,069,738 bssR OKFHMN_06060: rimO - 30S ribosomal protein S12 methylthiotransferase RimO, at 1,069,951 to 1,071,276 rimO OKFHMN_06065: OKFHMN_06065 - addiction module toxin RelE, at 1,071,502 to 1,071,888 _06065 OKFHMN_06070: yiaG - transcriptional regulator, at 1,071,878 to 1,072,207 yiaG OKFHMN_06075: dgcI - putative diguanylate cyclase DgcI, at 1,072,277 to 1,073,605 dgcI OKFHMN_06080: pdeI - putative cyclic di-GMP phosphodiesterase PdeI, at 1,073,613 to 1,075,961 pdeI OKFHMN_06085: gsiD - glutathione ABC transporter permease GsiD, at 1,076,139 to 1,077,050 gsiD OKFHMN_06090: gsiC - glutathione ABC transporter permease GsiC, at 1,077,053 to 1,077,973 gsiC OKFHMN_06095: gsiB - glutathione ABC transporter substrate-binding protein GsiB, at 1,077,991 to 1,079,529 gsiB OKFHMN_06100: gsiA - glutathione ABC transporter ATP-binding protein GsiA, at 1,079,549 to 1,081,420 gsiA OKFHMN_06105: iaaA - beta-aspartyl-peptidase, at 1,081,407 to 1,082,012 iaaA
Locus Name Description Strand Phenotype
OKFHMN_06055 bssR biofilm formation regulator BssR - insig.
OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO + cofit
OKFHMN_06065 OKFHMN_06065 addiction module toxin RelE + cofit
OKFHMN_06070 yiaG transcriptional regulator + no data
OKFHMN_06075 dgcI putative diguanylate cyclase DgcI - cofit
OKFHMN_06080 pdeI putative cyclic di-GMP phosphodiesterase PdeI - insig.
OKFHMN_06085 gsiD glutathione ABC transporter permease GsiD - insig.
OKFHMN_06090 gsiC glutathione ABC transporter permease GsiC - cofit
OKFHMN_06095 gsiB glutathione ABC transporter substrate-binding protein GsiB - insig.
OKFHMN_06100 gsiA glutathione ABC transporter ATP-binding protein GsiA - insig.
OKFHMN_06105 iaaA beta-aspartyl-peptidase - cofit

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