Gene info for OKFHMN_02525 in Escherichia coli ECRC100

Name: pdeR
Annotation: cyclic di-GMP phosphodiesterase
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 397,467 to 399,452
See nucleotide sequence around OKFHMN_02525 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntacrA and acrR are separated by 148 nucleotidesacrR and fabI_F203V are separated by 476 nucleotidesfabI_F203V and yciW are separated by 143 nucleotidesyciW and rnb are separated by 67 nucleotidesrnb and pdeR are separated by 234 nucleotidespdeR and yciZ are separated by 147 nucleotidesyciZ and yciT are separated by 89 nucleotidesyciT and osmB are separated by 268 nucleotidesosmB and yciH are separated by 125 nucleotidesyciH and pyrF overlap by 1 nucleotides OKFHMN_02500: acrA - efflux transporter periplasmic adaptor subunit, at 390,858 to 391,979 acrA OKFHMN_02505: acrR - TetR family transcriptional regulator, at 392,128 to 392,694 acrR OKFHMN_02510: fabI_F203V - enoyl-[acyl-carrier-protein] reductase FabI, at 393,171 to 393,959 _F203V OKFHMN_02515: yciW - Uncharacterized protein YciW, at 394,103 to 395,230 yciW OKFHMN_02520: rnb - exoribonuclease II, at 395,298 to 397,232 rnb OKFHMN_02525: pdeR - cyclic di-GMP phosphodiesterase, at 397,467 to 399,452 pdeR OKFHMN_02530: yciZ - UPF0509 protein YciZ, at 399,600 to 399,773 yciZ OKFHMN_02535: yciT - DNA-binding transcriptional regulator YciT, at 399,863 to 400,612 yciT OKFHMN_02540: osmB - osmotically-inducible lipoprotein OsmB, at 400,881 to 401,099 osmB OKFHMN_02545: yciH - stress response translation initiation inhibitor YciH, at 401,225 to 401,551 yciH OKFHMN_02550: pyrF - orotidine-5'-phosphate decarboxylase, at 401,551 to 402,348 pyrF
Locus Name Description Strand Phenotype
OKFHMN_02500 acrA efflux transporter periplasmic adaptor subunit - insig.
OKFHMN_02505 acrR TetR family transcriptional regulator - cofit
OKFHMN_02510 fabI_F203V enoyl-[acyl-carrier-protein] reductase FabI + no data
OKFHMN_02515 yciW Uncharacterized protein YciW + cofit
OKFHMN_02520 rnb exoribonuclease II + cofit
OKFHMN_02525 pdeR cyclic di-GMP phosphodiesterase + cofit
OKFHMN_02530 yciZ UPF0509 protein YciZ + insig.
OKFHMN_02535 yciT DNA-binding transcriptional regulator YciT + no data
OKFHMN_02540 osmB osmotically-inducible lipoprotein OsmB + no data
OKFHMN_02545 yciH stress response translation initiation inhibitor YciH - no data
OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase - cofit

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