Gene info for OKFHMN_00285 in Escherichia coli ECRC100

Name: etpD
Annotation: variant type II secretion system secretin EtpD
Type 1: Protein-coding gene
Located on scaffold contig_2, - strand, nucleotides 57,744 to 59,711
See nucleotide sequence around OKFHMN_00285 or for all of scaffold contig_2

Other databases: NCBI

Nearby Genes

500 ntgspI and gspH overlap by 4 nucleotidesgspH and gspG overlap by 4 nucleotidesgspG and gspF are separated by 30 nucleotidesgspF and gspE are separated by 1 nucleotidesgspE and etpD overlap by 1 nucleotidesetpD and gspC are separated by 0 nucleotidesgspC and stcE are separated by 86 nucleotidesstcE and OKFHMN_00300 are separated by 486 nucleotidesOKFHMN_00300 and tnpB are separated by 97 nucleotidestnpB and tnpB overlap by 4 nucleotides OKFHMN_00260: gspI - type II secretion system minor pseudopilin GspI, at 53,636 to 54,001 gspI OKFHMN_00265: gspH - type II secretion system minor pseudopilin GspH, at 53,998 to 54,552 gspH OKFHMN_00270: gspG - type II secretion system major pseudopilin GspG, at 54,549 to 54,983 gspG OKFHMN_00275: gspF - type II secretion system inner membrane protein GspF, at 55,014 to 56,237 gspF OKFHMN_00280: gspE - type II secretion system ATPase GspE, at 56,239 to 57,744 gspE OKFHMN_00285: etpD - variant type II secretion system secretin EtpD, at 57,744 to 59,711 etpD OKFHMN_00290: gspC - type II secretion system protein GspC, at 59,712 to 60,587 gspC OKFHMN_00295: stcE - metalloprotease StcE, at 60,674 to 63,334 stcE OKFHMN_00300: OKFHMN_00300 - Transposase IS3/family protein, at 63,821 to 63,931 _00300 OKFHMN_00305: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 64,029 to 64,409 tnpB OKFHMN_00310: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 64,406 to 64,753 tnpB
Locus Name Description Strand Phenotype
OKFHMN_00260 gspI type II secretion system minor pseudopilin GspI - cofit
OKFHMN_00265 gspH type II secretion system minor pseudopilin GspH - cofit
OKFHMN_00270 gspG type II secretion system major pseudopilin GspG - insig.
OKFHMN_00275 gspF type II secretion system inner membrane protein GspF - insig.
OKFHMN_00280 gspE type II secretion system ATPase GspE - cofit
OKFHMN_00285 etpD variant type II secretion system secretin EtpD - insig.
OKFHMN_00290 gspC type II secretion system protein GspC - insig.
OKFHMN_00295 stcE metalloprotease StcE - cofit
OKFHMN_00300 OKFHMN_00300 Transposase IS3/family protein + no data
OKFHMN_00305 tnpB IS66 family insertion sequence element accessory protein TnpB + no data
OKFHMN_00310 tnpB IS66 family insertion sequence element accessory protein TnpB + no data

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