Gene info for NOLOHH_13600 in Escherichia coli ECOR27

Name: vapC
Annotation: VapC toxin family PIN domain ribonuclease
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 2,641,474 to 2,641,872
See nucleotide sequence around NOLOHH_13600 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntdapA and bamC are separated by 16 nucleotidesbamC and NOLOHH_13585 overlap by 90 nucleotidesNOLOHH_13585 and purC are separated by 71 nucleotidespurC and vapB are separated by 115 nucleotidesvapB and vapC overlap by 1 nucleotidesvapC and ypfJ are separated by 146 nucleotidesypfJ and tmcA are separated by 14 nucleotidestmcA and ypfH are separated by 73 nucleotidesypfH and ypfN are separated by 109 nucleotidesypfN and dapE are separated by 27 nucleotides NOLOHH_13575: dapA - 4-hydroxy-tetrahydrodipicolinate synthase, at 2,638,237 to 2,639,115 dapA NOLOHH_13580: bamC - outer membrane protein assembly factor BamC, at 2,639,132 to 2,640,166 bamC NOLOHH_13585: NOLOHH_13585 - hypothetical protein, at 2,640,077 to 2,640,307 _13585 NOLOHH_13590: purC - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 2,640,379 to 2,641,092 purC NOLOHH_13595: vapB - toxin-antitoxin system antitoxin VapB, at 2,641,208 to 2,641,474 vapB NOLOHH_13600: vapC - VapC toxin family PIN domain ribonuclease, at 2,641,474 to 2,641,872 vapC NOLOHH_13605: ypfJ - Uncharacterized protein YpfJ, at 2,642,019 to 2,642,882 ypfJ NOLOHH_13610: tmcA - tRNA cytosine(34) acetyltransferase TmcA, at 2,642,897 to 2,644,912 tmcA NOLOHH_13615: ypfH - esterase, at 2,644,986 to 2,645,684 ypfH NOLOHH_13630: ypfN - UPF0370 protein YpfN, at 2,645,794 to 2,645,994 ypfN NOLOHH_13635: dapE - succinyl-diaminopimelate desuccinylase, at 2,646,022 to 2,647,149 dapE
Locus Name Description Strand Phenotype
NOLOHH_13575 dapA 4-hydroxy-tetrahydrodipicolinate synthase + no data
NOLOHH_13580 bamC outer membrane protein assembly factor BamC + cofit
NOLOHH_13585 NOLOHH_13585 hypothetical protein - cofit
NOLOHH_13590 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase + strong
NOLOHH_13595 vapB toxin-antitoxin system antitoxin VapB + cofit
NOLOHH_13600 vapC VapC toxin family PIN domain ribonuclease + insig.
NOLOHH_13605 ypfJ Uncharacterized protein YpfJ + insig.
NOLOHH_13610 tmcA tRNA cytosine(34) acetyltransferase TmcA + insig.
NOLOHH_13615 ypfH esterase + cofit
NOLOHH_13630 ypfN UPF0370 protein YpfN - insig.
NOLOHH_13635 dapE succinyl-diaminopimelate desuccinylase - no data

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