Gene info for MCAODC_11020 in Escherichia coli ECRC101

Name: rpoS
Annotation: RNA polymerase sigma factor RpoS
Type 1: Protein-coding gene
Located on scaffold contig_4, + strand, nucleotides 2,196,675 to 2,197,667
See nucleotide sequence around MCAODC_11020 or for all of scaffold contig_4

Other databases: NCBI

Nearby Genes

500 ntispF and truD overlap by 4 nucleotidestruD and surE overlap by 20 nucleotidessurE and pcm overlap by 7 nucleotidespcm and nlpD are separated by 139 nucleotidesnlpD and rpoS are separated by 62 nucleotidesrpoS and hosA are separated by 119 nucleotideshosA and ecdB are separated by 146 nucleotidesecdB and edcC overlap by 1 nucleotidesedcC and ecdD are separated by 10 nucleotidesecdD and pphB are separated by 40 nucleotides MCAODC_10995: ispF - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 2,192,494 to 2,192,973 ispF MCAODC_11000: truD - tRNA pseudouridine(13) synthase TruD, at 2,192,970 to 2,194,019 truD MCAODC_11005: surE - 5'/3'-nucleotidase SurE, at 2,194,000 to 2,194,761 surE MCAODC_11010: pcm - protein-L-isoaspartate O-methyltransferase, at 2,194,755 to 2,195,381 pcm MCAODC_11015: nlpD - murein hydrolase activator NlpD, at 2,195,521 to 2,196,612 nlpD MCAODC_11020: rpoS - RNA polymerase sigma factor RpoS, at 2,196,675 to 2,197,667 rpoS MCAODC_11025: hosA - Transcriptional regulator HosA, at 2,197,787 to 2,198,194 hosA MCAODC_11030: ecdB - putative UbiX-like flavin prenyltransferase, at 2,198,341 to 2,198,934 ecdB MCAODC_11035: edcC - Phenolic acid decarboxylase, at 2,198,934 to 2,200,361 edcC MCAODC_11040: ecdD - Protein EcdD, at 2,200,372 to 2,200,608 ecdD MCAODC_11045: pphB - protein-serine/threonine phosphatase, at 2,200,649 to 2,201,305 pphB
Locus Name Description Strand Phenotype
MCAODC_10995 ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + no data
MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD + insig.
MCAODC_11005 surE 5'/3'-nucleotidase SurE + insig.
MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase + insig.
MCAODC_11015 nlpD murein hydrolase activator NlpD + cofit
MCAODC_11020 rpoS RNA polymerase sigma factor RpoS + strong
MCAODC_11025 hosA Transcriptional regulator HosA - sig.
MCAODC_11030 ecdB putative UbiX-like flavin prenyltransferase + insig.
MCAODC_11035 edcC Phenolic acid decarboxylase + insig.
MCAODC_11040 ecdD Protein EcdD + insig.
MCAODC_11045 pphB protein-serine/threonine phosphatase - insig.

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