Gene info for MCAODC_11000 in Escherichia coli ECRC101

Name: truD
Annotation: tRNA pseudouridine(13) synthase TruD
Type 1: Protein-coding gene
Located on scaffold contig_4, + strand, nucleotides 2,192,970 to 2,194,019
See nucleotide sequence around MCAODC_11000 or for all of scaffold contig_4

Other databases: NCBI

Nearby Genes

500 ntcysC and MCAODC_10980 are separated by 49 nucleotidesMCAODC_10980 and ftsB are separated by 193 nucleotidesftsB and ispD are separated by 18 nucleotidesispD and ispF overlap by 1 nucleotidesispF and truD overlap by 4 nucleotidestruD and surE overlap by 20 nucleotidessurE and pcm overlap by 7 nucleotidespcm and nlpD are separated by 139 nucleotidesnlpD and rpoS are separated by 62 nucleotidesrpoS and hosA are separated by 119 nucleotides MCAODC_10975: cysC - Adenylyl-sulfate kinase, at 2,190,282 to 2,190,887 cysC MCAODC_10980: MCAODC_10980 - DUF3561 domain-containing protein, at 2,190,937 to 2,191,260 _10980 MCAODC_10985: ftsB - cell division protein FtsB, at 2,191,454 to 2,191,765 ftsB MCAODC_10990: ispD - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 2,191,784 to 2,192,494 ispD MCAODC_10995: ispF - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 2,192,494 to 2,192,973 ispF MCAODC_11000: truD - tRNA pseudouridine(13) synthase TruD, at 2,192,970 to 2,194,019 truD MCAODC_11005: surE - 5'/3'-nucleotidase SurE, at 2,194,000 to 2,194,761 surE MCAODC_11010: pcm - protein-L-isoaspartate O-methyltransferase, at 2,194,755 to 2,195,381 pcm MCAODC_11015: nlpD - murein hydrolase activator NlpD, at 2,195,521 to 2,196,612 nlpD MCAODC_11020: rpoS - RNA polymerase sigma factor RpoS, at 2,196,675 to 2,197,667 rpoS MCAODC_11025: hosA - Transcriptional regulator HosA, at 2,197,787 to 2,198,194 hosA
Locus Name Description Strand Phenotype
MCAODC_10975 cysC Adenylyl-sulfate kinase + strong
MCAODC_10980 MCAODC_10980 DUF3561 domain-containing protein + insig.
MCAODC_10985 ftsB cell division protein FtsB + no data
MCAODC_10990 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase + no data
MCAODC_10995 ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + no data
MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD + cofit
MCAODC_11005 surE 5'/3'-nucleotidase SurE + insig.
MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase + insig.
MCAODC_11015 nlpD murein hydrolase activator NlpD + cofit
MCAODC_11020 rpoS RNA polymerase sigma factor RpoS + strong
MCAODC_11025 hosA Transcriptional regulator HosA - insig.

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