Gene info for LU632_RS25230 in Erwinia tracheiphila SCR3

Name: gspD
Annotation: type II secretion system secretin GspD
Type 1: Protein-coding gene
Located on scaffold NZ_CP089934, + strand, nucleotides 4,798,474 to 4,800,675
See nucleotide sequence around LU632_RS25230 or for all of scaffold NZ_CP089934

Other databases: NCBI

Nearby Genes

500 ntLU632_RS25205 and LU632_RS25210 are separated by 149 nucleotidesLU632_RS25210 and LU632_RS25215 are separated by 53 nucleotidesLU632_RS25215 and LU632_RS25220 are separated by 168 nucleotidesLU632_RS25220 and LU632_RS25225 are separated by 519 nucleotidesLU632_RS25225 and gspD are separated by 28 nucleotidesgspD and gspE overlap by 1 nucleotidesgspE and gspF overlap by 11 nucleotidesgspF and gspG are separated by 22 nucleotidesgspG and gspI are separated by 1 nucleotidesgspI and gspJ overlap by 4 nucleotides LU632_RS25205: LU632_RS25205 - tail fiber protein, at 4,795,198 to 4,795,590 _RS25205 LU632_RS25210: LU632_RS25210 - recombinase family protein, at 4,795,740 to 4,796,318 _RS25210 LU632_RS25215: LU632_RS25215 - DUF1471 domain-containing protein, at 4,796,372 to 4,796,575 _RS25215 LU632_RS25220: LU632_RS25220 - IS6 family transposase, at 4,796,744 to 4,797,419 _RS25220 LU632_RS25225: LU632_RS25225 - hypothetical protein, at 4,797,939 to 4,798,445 _RS25225 LU632_RS25230: gspD - type II secretion system secretin GspD, at 4,798,474 to 4,800,675 gspD LU632_RS25235: gspE - type II secretion system ATPase GspE, at 4,800,675 to 4,802,156 gspE LU632_RS25240: gspF - type II secretion system inner membrane protein GspF, at 4,802,146 to 4,803,345 gspF LU632_RS25245: gspG - type II secretion system major pseudopilin GspG, at 4,803,368 to 4,803,811 gspG LU632_RS25250: gspI - type II secretion system minor pseudopilin GspI, at 4,803,813 to 4,804,208 gspI LU632_RS25255: gspJ - type II secretion system minor pseudopilin GspJ, at 4,804,205 to 4,804,756 gspJ
Locus Name Description Strand Phenotype
LU632_RS25205 LU632_RS25205 tail fiber protein - no data
LU632_RS25210 LU632_RS25210 recombinase family protein + insig.
LU632_RS25215 LU632_RS25215 DUF1471 domain-containing protein + no data
LU632_RS25220 LU632_RS25220 IS6 family transposase + insig.
LU632_RS25225 LU632_RS25225 hypothetical protein + insig.
LU632_RS25230 gspD type II secretion system secretin GspD + insig.
LU632_RS25235 gspE type II secretion system ATPase GspE + insig.
LU632_RS25240 gspF type II secretion system inner membrane protein GspF + insig.
LU632_RS25245 gspG type II secretion system major pseudopilin GspG + insig.
LU632_RS25250 gspI type II secretion system minor pseudopilin GspI + insig.
LU632_RS25255 gspJ type II secretion system minor pseudopilin GspJ + insig.

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