Gene info for LU632_RS21915 in Erwinia tracheiphila SCR3

Name: rfaD
Annotation: ADP-glyceromanno-heptose 6-epimerase
Type 1: Protein-coding gene
Located on scaffold NZ_CP089934, + strand, nucleotides 4,185,970 to 4,186,902
See nucleotide sequence around LU632_RS21915 or for all of scaffold NZ_CP089934

Other databases: NCBI

Nearby Genes

500 ntLU632_RS21890 and envC are separated by 321 nucleotidesenvC and LU632_RS21900 are separated by 2 nucleotidesLU632_RS21900 and LU632_RS21905 are separated by 51 nucleotidesLU632_RS21905 and LU632_RS21910 are separated by 52 nucleotidesLU632_RS21910 and rfaD are separated by 120 nucleotidesrfaD and rfaF are separated by 15 nucleotidesrfaF and rfaC overlap by 13 nucleotidesrfaC and LU632_RS21930 are separated by 6 nucleotidesLU632_RS21930 and LU632_RS21935 are separated by 42 nucleotidesLU632_RS21935 and LU632_RS21940 are separated by 275 nucleotides LU632_RS21890: LU632_RS21890 - rhodanese-like domain-containing protein, at 4,180,664 to 4,181,095 _RS21890 LU632_RS21895: envC - murein hydrolase activator EnvC, at 4,181,417 to 4,182,721 envC LU632_RS21900: LU632_RS21900 - divergent polysaccharide deacetylase family protein, at 4,182,724 to 4,183,659 _RS21900 LU632_RS21905: LU632_RS21905 - glycosyltransferase, at 4,183,711 to 4,184,885 _RS21905 LU632_RS21910: LU632_RS21910 - hypothetical protein, at 4,184,938 to 4,185,849 _RS21910 LU632_RS21915: rfaD - ADP-glyceromanno-heptose 6-epimerase, at 4,185,970 to 4,186,902 rfaD LU632_RS21920: rfaF - ADP-heptose--LPS heptosyltransferase RfaF, at 4,186,918 to 4,187,979 rfaF LU632_RS21925: rfaC - lipopolysaccharide heptosyltransferase RfaC, at 4,187,967 to 4,188,941 rfaC LU632_RS21930: LU632_RS21930 - glycosyltransferase, at 4,188,948 to 4,189,865 _RS21930 LU632_RS21935: LU632_RS21935 - deacetylase, at 4,189,908 to 4,190,885 _RS21935 LU632_RS21940: LU632_RS21940 - glycosyltransferase, at 4,191,161 to 4,192,306 _RS21940
Locus Name Description Strand Phenotype
LU632_RS21890 LU632_RS21890 rhodanese-like domain-containing protein - sig.
LU632_RS21895 envC murein hydrolase activator EnvC + strong
LU632_RS21900 LU632_RS21900 divergent polysaccharide deacetylase family protein + cofit
LU632_RS21905 LU632_RS21905 glycosyltransferase + insig.
LU632_RS21910 LU632_RS21910 hypothetical protein + insig.
LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase + no data
LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF + no data
LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC + no data
LU632_RS21930 LU632_RS21930 glycosyltransferase + strong
LU632_RS21935 LU632_RS21935 deacetylase - insig.
LU632_RS21940 LU632_RS21940 glycosyltransferase + strong

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