Gene info for LU632_RS21265 in Erwinia tracheiphila SCR3

Name: lptC
Annotation: LPS export ABC transporter periplasmic protein LptC
Type 1: Protein-coding gene
Located on scaffold NZ_CP089934, + strand, nucleotides 4,060,271 to 4,060,846
See nucleotide sequence around LU632_RS21265 or for all of scaffold NZ_CP089934

Other databases: NCBI

Nearby Genes

500 ntmlaE and mlaF are separated by 7 nucleotidesmlaF and LU632_RS21250 are separated by 225 nucleotidesLU632_RS21250 and kdsD are separated by 5 nucleotideskdsD and kdsC are separated by 15 nucleotideskdsC and lptC overlap by 4 nucleotideslptC and lptA overlap by 29 nucleotideslptA and lptB are separated by 10 nucleotideslptB and rpoN are separated by 46 nucleotidesrpoN and hpf are separated by 22 nucleotideshpf and ptsN are separated by 197 nucleotides LU632_RS21240: mlaE - lipid asymmetry maintenance ABC transporter permease subunit MlaE, at 4,055,883 to 4,056,665 mlaE LU632_RS21245: mlaF - phospholipid ABC transporter ATP-binding protein MlaF, at 4,056,673 to 4,057,485 mlaF LU632_RS21250: LU632_RS21250 - calcium/sodium antiporter, at 4,057,711 to 4,058,700 _RS21250 LU632_RS21255: kdsD - arabinose-5-phosphate isomerase KdsD, at 4,058,706 to 4,059,692 kdsD LU632_RS21260: kdsC - 3-deoxy-manno-octulosonate-8-phosphatase KdsC, at 4,059,708 to 4,060,274 kdsC LU632_RS21265: lptC - LPS export ABC transporter periplasmic protein LptC, at 4,060,271 to 4,060,846 lptC LU632_RS21270: lptA - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 4,060,818 to 4,061,366 lptA LU632_RS21275: lptB - LPS export ABC transporter ATP-binding protein, at 4,061,377 to 4,062,102 lptB LU632_RS21280: rpoN - RNA polymerase factor sigma-54, at 4,062,149 to 4,063,582 rpoN LU632_RS21285: hpf - ribosome hibernation promoting factor, at 4,063,605 to 4,063,892 hpf LU632_RS21290: ptsN - PTS IIA-like nitrogen regulatory protein PtsN, at 4,064,090 to 4,064,575 ptsN
Locus Name Description Strand Phenotype
LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE - strong
LU632_RS21245 mlaF phospholipid ABC transporter ATP-binding protein MlaF - strong
LU632_RS21250 LU632_RS21250 calcium/sodium antiporter + insig.
LU632_RS21255 kdsD arabinose-5-phosphate isomerase KdsD + no data
LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC + cofit
LU632_RS21265 lptC LPS export ABC transporter periplasmic protein LptC + no data
LU632_RS21270 lptA lipopolysaccharide ABC transporter substrate-binding protein LptA + no data
LU632_RS21275 lptB LPS export ABC transporter ATP-binding protein + no data
LU632_RS21280 rpoN RNA polymerase factor sigma-54 + no data
LU632_RS21285 hpf ribosome hibernation promoting factor + insig.
LU632_RS21290 ptsN PTS IIA-like nitrogen regulatory protein PtsN + no data

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