Gene info for LRK53_RS12280 in Rhodanobacter sp000427505 FW510-R12

Annotation: tRNA pseudouridine(13) synthase TruD
Type 1: Protein-coding gene
Located on scaffold NZ_CP088923, - strand, nucleotides 2,724,742 to 2,725,752
See nucleotide sequence around LRK53_RS12280 or for all of scaffold NZ_CP088923

Other databases: NCBI

Nearby Genes

500 ntLRK53_RS12255 and LRK53_RS12260 are separated by 50 nucleotidesLRK53_RS12260 and LRK53_RS12265 overlap by 1 nucleotidesLRK53_RS12265 and LRK53_RS12270 are separated by 3 nucleotidesLRK53_RS12270 and LRK53_RS12275 are separated by 148 nucleotidesLRK53_RS12275 and LRK53_RS12280 are separated by 153 nucleotidesLRK53_RS12280 and LRK53_RS12285 are separated by 176 nucleotidesLRK53_RS12285 and LRK53_RS12290 overlap by 4 nucleotidesLRK53_RS12290 and LRK53_RS12295 overlap by 1 nucleotidesLRK53_RS12295 and LRK53_RS12300 overlap by 4 nucleotidesLRK53_RS12300 and LRK53_RS12305 are separated by 10 nucleotides LRK53_RS12255: LRK53_RS12255 - peptidoglycan DD-metalloendopeptidase family protein, at 2,720,756 to 2,721,754 _RS12255 LRK53_RS12260: LRK53_RS12260 - VTT domain-containing protein, at 2,721,805 to 2,722,413 _RS12260 LRK53_RS12265: LRK53_RS12265 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 2,722,413 to 2,723,093 _RS12265 LRK53_RS12270: LRK53_RS12270 - 5'/3'-nucleotidase SurE, at 2,723,097 to 2,723,894 _RS12270 LRK53_RS12275: LRK53_RS12275 - Smr/MutS family protein, at 2,724,043 to 2,724,588 _RS12275 LRK53_RS12280: LRK53_RS12280 - tRNA pseudouridine(13) synthase TruD, at 2,724,742 to 2,725,752 _RS12280 LRK53_RS12285: LRK53_RS12285 - magnesium transporter, at 2,725,929 to 2,727,323 _RS12285 LRK53_RS12290: LRK53_RS12290 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 2,727,320 to 2,727,793 _RS12290 LRK53_RS12295: LRK53_RS12295 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 2,727,793 to 2,728,488 _RS12295 LRK53_RS12300: LRK53_RS12300 - cell division protein FtsB, at 2,728,485 to 2,728,820 _RS12300 LRK53_RS12305: LRK53_RS12305 - phosphopyruvate hydratase, at 2,728,831 to 2,730,144 _RS12305
Locus Name Description Strand Phenotype
LRK53_RS12255 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein - no data
LRK53_RS12260 LRK53_RS12260 VTT domain-containing protein - cofit
LRK53_RS12265 LRK53_RS12265 protein-L-isoaspartate(D-aspartate) O-methyltransferase - insig.
LRK53_RS12270 LRK53_RS12270 5'/3'-nucleotidase SurE - cofit
LRK53_RS12275 LRK53_RS12275 Smr/MutS family protein + insig.
LRK53_RS12280 LRK53_RS12280 tRNA pseudouridine(13) synthase TruD - insig.
LRK53_RS12285 LRK53_RS12285 magnesium transporter - insig.
LRK53_RS12290 LRK53_RS12290 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - no data
LRK53_RS12295 LRK53_RS12295 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - no data
LRK53_RS12300 LRK53_RS12300 cell division protein FtsB - no data
LRK53_RS12305 LRK53_RS12305 phosphopyruvate hydratase - no data

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