Gene info for LRK53_RS05950 in Rhodanobacter sp000427505 FW510-R12

Annotation: type II toxin-antitoxin system VapC family toxin
Type 1: Protein-coding gene
Located on scaffold NZ_CP088923, + strand, nucleotides 1,374,973 to 1,375,368
See nucleotide sequence around LRK53_RS05950 or for all of scaffold NZ_CP088923

Other databases: NCBI

Nearby Genes

500 ntLRK53_RS05925 and LRK53_RS05930 are separated by 124 nucleotidesLRK53_RS05930 and LRK53_RS05935 are separated by 360 nucleotidesLRK53_RS05935 and LRK53_RS05940 are separated by 145 nucleotidesLRK53_RS05940 and LRK53_RS05945 are separated by 477 nucleotidesLRK53_RS05945 and LRK53_RS05950 overlap by 4 nucleotidesLRK53_RS05950 and LRK53_RS05955 are separated by 155 nucleotidesLRK53_RS05955 and LRK53_RS05960 are separated by 38 nucleotidesLRK53_RS05960 and LRK53_RS05965 are separated by 331 nucleotidesLRK53_RS05965 and LRK53_RS05970 overlap by 8 nucleotidesLRK53_RS05970 and LRK53_RS05975 overlap by 8 nucleotides LRK53_RS05925: LRK53_RS05925 - A24 family peptidase, at 1,369,494 to 1,370,351 _RS05925 LRK53_RS05930: LRK53_RS05930 - endonuclease domain-containing protein, at 1,370,476 to 1,370,754 _RS05930 LRK53_RS05935: LRK53_RS05935 - type II secretion system F family protein, at 1,371,115 to 1,372,386 _RS05935 LRK53_RS05940: LRK53_RS05940 - type IV-A pilus assembly ATPase PilB, at 1,372,532 to 1,374,256 _RS05940 LRK53_RS05945: LRK53_RS05945 - AbrB/MazE/SpoVT family DNA-binding domain-containing protein, at 1,374,734 to 1,374,976 _RS05945 LRK53_RS05950: LRK53_RS05950 - type II toxin-antitoxin system VapC family toxin, at 1,374,973 to 1,375,368 _RS05950 LRK53_RS05955: LRK53_RS05955 - DUF86 domain-containing protein, at 1,375,524 to 1,375,850 _RS05955 LRK53_RS05960: LRK53_RS05960 - nucleotidyltransferase family protein, at 1,375,889 to 1,376,179 _RS05960 LRK53_RS05965: LRK53_RS05965 - glycosyltransferase family 2 protein, at 1,376,511 to 1,377,365 _RS05965 LRK53_RS05970: LRK53_RS05970 - glycosyltransferase family 4 protein, at 1,377,358 to 1,378,518 _RS05970 LRK53_RS05975: LRK53_RS05975 - class I SAM-dependent methyltransferase, at 1,378,511 to 1,379,281 _RS05975
Locus Name Description Strand Phenotype
LRK53_RS05925 LRK53_RS05925 A24 family peptidase - cofit
LRK53_RS05930 LRK53_RS05930 endonuclease domain-containing protein - insig.
LRK53_RS05935 LRK53_RS05935 type II secretion system F family protein - cofit
LRK53_RS05940 LRK53_RS05940 type IV-A pilus assembly ATPase PilB - cofit
LRK53_RS05945 LRK53_RS05945 AbrB/MazE/SpoVT family DNA-binding domain-containing protein + no data
LRK53_RS05950 LRK53_RS05950 type II toxin-antitoxin system VapC family toxin + insig.
LRK53_RS05955 LRK53_RS05955 DUF86 domain-containing protein - insig.
LRK53_RS05960 LRK53_RS05960 nucleotidyltransferase family protein - no data
LRK53_RS05965 LRK53_RS05965 glycosyltransferase family 2 protein + cofit
LRK53_RS05970 LRK53_RS05970 glycosyltransferase family 4 protein + cofit
LRK53_RS05975 LRK53_RS05975 class I SAM-dependent methyltransferase + insig.

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