Gene info for JDDGAC_26220 in Escherichia coli ECRC98

Name: tnpB
Annotation: IS66 family insertion sequence element accessory protein TnpB
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 5,013,450 to 5,013,830
See nucleotide sequence around JDDGAC_26220 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntVal_trna and Val_trna are separated by 44 nucleotidesVal_trna and gltX are separated by 258 nucleotidesgltX and tnpA are separated by 0 nucleotidestnpA and JDDGAC_26215 are separated by 67 nucleotidesJDDGAC_26215 and tnpB are separated by 75 nucleotidestnpB and tnpB overlap by 4 nucleotidestnpB and JDDGAC_26230 are separated by 49 nucleotidesJDDGAC_26230 and insQ are separated by 95 nucleotidesinsQ and yfeD are separated by 39 nucleotidesyfeD and yfeC are separated by 22 nucleotides JDDGAC_26195: Val_trna - tRNA-Val(tac), at 5,010,070 to 5,010,145 _trna JDDGAC_26200: Val_trna - tRNA-Val(tac), at 5,010,190 to 5,010,265 _trna JDDGAC_26205: gltX - glutamate--tRNA ligase, at 5,010,524 to 5,011,939 gltX JDDGAC_26210: tnpA - IS200/IS605 family transposase, at 5,011,940 to 5,012,482 tnpA JDDGAC_26215: JDDGAC_26215 - RNA-guided endonuclease TnpB family protein, at 5,012,550 to 5,013,374 _26215 JDDGAC_26220: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 5,013,450 to 5,013,830 tnpB JDDGAC_26225: tnpB - IS66 family insertion sequence element accessory protein TnpB, at 5,013,827 to 5,014,174 tnpB JDDGAC_26230: JDDGAC_26230 - IS66-like element ISEc8 family transposase, at 5,014,224 to 5,015,762 _26230 JDDGAC_26235: insQ - Putative RNA-guided DNA endonuclease InsQ, at 5,015,858 to 5,016,148 insQ JDDGAC_26240: yfeD - Uncharacterized protein YfeD, at 5,016,188 to 5,016,559 yfeD JDDGAC_26245: yfeC - Uncharacterized protein YfeC, at 5,016,582 to 5,016,941 yfeC
Locus Name Description Strand Phenotype
JDDGAC_26195 Val_trna tRNA-Val(tac) - no data
JDDGAC_26200 Val_trna tRNA-Val(tac) - no data
JDDGAC_26205 gltX glutamate--tRNA ligase + no data
JDDGAC_26210 tnpA IS200/IS605 family transposase - insig.
JDDGAC_26215 JDDGAC_26215 RNA-guided endonuclease TnpB family protein + no data
JDDGAC_26220 tnpB IS66 family insertion sequence element accessory protein TnpB + no data
JDDGAC_26225 tnpB IS66 family insertion sequence element accessory protein TnpB + no data
JDDGAC_26230 JDDGAC_26230 IS66-like element ISEc8 family transposase + no data
JDDGAC_26235 insQ Putative RNA-guided DNA endonuclease InsQ + insig.
JDDGAC_26240 yfeD Uncharacterized protein YfeD - insig.
JDDGAC_26245 yfeC Uncharacterized protein YfeC - insig.

Or browse nearby genes

Or see the comparative fitness browser