Gene info for JDDGAC_24140 in Escherichia coli ECRC98

Name: truD
Annotation: tRNA pseudouridine(13) synthase TruD
Type 1: Protein-coding gene
Located on scaffold contig_1, + strand, nucleotides 4,628,601 to 4,629,650
See nucleotide sequence around JDDGAC_24140 or for all of scaffold contig_1

Other databases: NCBI

Nearby Genes

500 ntcysC and JDDGAC_24120 are separated by 49 nucleotidesJDDGAC_24120 and ftsB are separated by 193 nucleotidesftsB and ispD are separated by 18 nucleotidesispD and ispF overlap by 1 nucleotidesispF and truD overlap by 4 nucleotidestruD and surE overlap by 20 nucleotidessurE and pcm overlap by 7 nucleotidespcm and nlpD are separated by 139 nucleotidesnlpD and rpoS are separated by 62 nucleotidesrpoS and hosA are separated by 119 nucleotides JDDGAC_24115: cysC - Adenylyl-sulfate kinase, at 4,625,913 to 4,626,518 cysC JDDGAC_24120: JDDGAC_24120 - DUF3561 domain-containing protein, at 4,626,568 to 4,626,891 _24120 JDDGAC_24125: ftsB - cell division protein FtsB, at 4,627,085 to 4,627,396 ftsB JDDGAC_24130: ispD - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 4,627,415 to 4,628,125 ispD JDDGAC_24135: ispF - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 4,628,125 to 4,628,604 ispF JDDGAC_24140: truD - tRNA pseudouridine(13) synthase TruD, at 4,628,601 to 4,629,650 truD JDDGAC_24145: surE - 5'/3'-nucleotidase SurE, at 4,629,631 to 4,630,392 surE JDDGAC_24150: pcm - protein-L-isoaspartate O-methyltransferase, at 4,630,386 to 4,631,012 pcm JDDGAC_24155: nlpD - murein hydrolase activator NlpD, at 4,631,152 to 4,632,291 nlpD JDDGAC_24160: rpoS - RNA polymerase sigma factor RpoS, at 4,632,354 to 4,633,346 rpoS JDDGAC_24165: hosA - Transcriptional regulator HosA, at 4,633,466 to 4,633,873 hosA
Locus Name Description Strand Phenotype
JDDGAC_24115 cysC Adenylyl-sulfate kinase + strong
JDDGAC_24120 JDDGAC_24120 DUF3561 domain-containing protein + cofit
JDDGAC_24125 ftsB cell division protein FtsB + no data
JDDGAC_24130 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase + no data
JDDGAC_24135 ispF 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + no data
JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD + cofit
JDDGAC_24145 surE 5'/3'-nucleotidase SurE + cofit
JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase + cofit
JDDGAC_24155 nlpD murein hydrolase activator NlpD + insig.
JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS + cofit
JDDGAC_24165 hosA Transcriptional regulator HosA - cofit

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